Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 ARRB2-218ENST00000575877 1579 ntTSL 5 BASIC13.37□□□□□ -0.27
COL12A1Q99715 AP002414.2-201ENST00000591780 3365 ntBASIC13.37□□□□□ -0.27
COL12A1Q99715 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
COL12A1Q99715 PRAL-201ENST00000624952 3286 ntBASIC13.37□□□□□ -0.27
COL12A1Q99715 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COL12A1Q99715 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
COL12A1Q99715 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.37□□□□□ -0.27
COL12A1Q99715 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COL12A1Q99715 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC13.37□□□□□ -0.27
COL12A1Q99715 AL627422.1-201ENST00000434104 580 ntBASIC13.37□□□□□ -0.27
COL12A1Q99715 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
COL12A1Q99715 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC13.37□□□□□ -0.27
COL12A1Q99715 MIR4522-201ENST00000584932 87 ntBASIC13.37□□□□□ -0.27
COL12A1Q99715 AC012073.1-201ENST00000606114 1108 ntBASIC13.37□□□□□ -0.27
COL12A1Q99715 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
COL12A1Q99715 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC13.37□□□□□ -0.27
COL12A1Q99715 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
COL12A1Q99715 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
COL12A1Q99715 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COL12A1Q99715 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
COL12A1Q99715 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COL12A1Q99715 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
COL12A1Q99715 AL627231.1-201ENST00000394467 1125 ntBASIC13.36□□□□□ -0.27
COL12A1Q99715 AC027237.1-201ENST00000560942 655 ntBASIC13.36□□□□□ -0.27
COL12A1Q99715 NAA38-205ENST00000575771 852 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COL12A1Q99715 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
COL12A1Q99715 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
COL12A1Q99715 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COL12A1Q99715 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
COL12A1Q99715 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.36□□□□□ -0.27
COL12A1Q99715 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC13.36□□□□□ -0.27
COL12A1Q99715 KRT8P21-201ENST00000430398 1491 ntBASIC13.36□□□□□ -0.27
COL12A1Q99715 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
COL12A1Q99715 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC13.36□□□□□ -0.27
COL12A1Q99715 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
COL12A1Q99715 AL157414.3-201ENST00000624276 1954 ntBASIC13.36□□□□□ -0.27
COL12A1Q99715 HNRNPA1P41-201ENST00000397777 928 ntBASIC13.36□□□□□ -0.27
COL12A1Q99715 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
COL12A1Q99715 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.36□□□□□ -0.27
COL12A1Q99715 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC13.36□□□□□ -0.27
COL12A1Q99715 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
COL12A1Q99715 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
COL12A1Q99715 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC13.36□□□□□ -0.27
COL12A1Q99715 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
COL12A1Q99715 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
COL12A1Q99715 LINC01144-201ENST00000626198 1710 ntBASIC13.36□□□□□ -0.27
COL12A1Q99715 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COL12A1Q99715 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
COL12A1Q99715 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
COL12A1Q99715 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
COL12A1Q99715 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
COL12A1Q99715 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COL12A1Q99715 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.36□□□□□ -0.27
COL12A1Q99715 AC078925.2-201ENST00000624013 1973 ntBASIC13.36□□□□□ -0.27
COL12A1Q99715 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC13.36□□□□□ -0.27
COL12A1Q99715 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COL12A1Q99715 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.36□□□□□ -0.27
COL12A1Q99715 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
COL12A1Q99715 JPT2-203ENST00000382711 894 ntTSL 4 BASIC13.36□□□□□ -0.27
COL12A1Q99715 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC13.36□□□□□ -0.27
COL12A1Q99715 PSMD4P1-201ENST00000433951 1109 ntBASIC13.36□□□□□ -0.27
COL12A1Q99715 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC13.36□□□□□ -0.27
COL12A1Q99715 CHMP1AP1-201ENST00000445563 662 ntBASIC13.36□□□□□ -0.27
COL12A1Q99715 AC093752.3-201ENST00000567343 901 ntBASIC13.36□□□□□ -0.27
COL12A1Q99715 AC006548.2-201ENST00000605217 529 ntBASIC13.36□□□□□ -0.27
COL12A1Q99715 AP003900.1-201ENST00000622592 859 ntTSL 3 BASIC13.36□□□□□ -0.27
COL12A1Q99715 CR392039.1-201ENST00000623217 204 ntBASIC13.36□□□□□ -0.27
COL12A1Q99715 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
COL12A1Q99715 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
COL12A1Q99715 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COL12A1Q99715 AC080080.1-201ENST00000625121 2420 ntBASIC13.35□□□□□ -0.27
COL12A1Q99715 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
COL12A1Q99715 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
COL12A1Q99715 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COL12A1Q99715 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COL12A1Q99715 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
COL12A1Q99715 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COL12A1Q99715 MIR566-201ENST00000385187 94 ntBASIC13.35□□□□□ -0.27
COL12A1Q99715 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC13.35□□□□□ -0.27
COL12A1Q99715 RCC2P8-201ENST00000502779 1035 ntBASIC13.35□□□□□ -0.27
COL12A1Q99715 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COL12A1Q99715 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC13.35□□□□□ -0.27
COL12A1Q99715 AC023090.1-201ENST00000592906 502 ntTSL 3 BASIC13.35□□□□□ -0.27
COL12A1Q99715 AL139339.2-201ENST00000608063 657 ntBASIC13.35□□□□□ -0.27
COL12A1Q99715 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COL12A1Q99715 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC13.35□□□□□ -0.27
COL12A1Q99715 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COL12A1Q99715 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COL12A1Q99715 AC020910.5-201ENST00000623668 1865 ntBASIC13.35□□□□□ -0.27
COL12A1Q99715 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
COL12A1Q99715 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COL12A1Q99715 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
COL12A1Q99715 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COL12A1Q99715 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
COL12A1Q99715 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
COL12A1Q99715 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
COL12A1Q99715 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.35□□□□□ -0.27
COL12A1Q99715 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.35□□□□□ -0.27
COL12A1Q99715 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.35□□□□□ -0.27
COL12A1Q99715 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms