Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC85AQ96PX6 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC85AQ96PX6 TEX30-203ENST00000376022 828 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC85AQ96PX6 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC85AQ96PX6 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC85AQ96PX6 AC026954.1-201ENST00000429771 1293 ntBASIC19.35■□□□□ 0.69
CCDC85AQ96PX6 AC016694.1-201ENST00000434179 700 ntBASIC19.35■□□□□ 0.69
CCDC85AQ96PX6 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
CCDC85AQ96PX6 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC85AQ96PX6 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC19.35■□□□□ 0.69
CCDC85AQ96PX6 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC19.35■□□□□ 0.69
CCDC85AQ96PX6 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC85AQ96PX6 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC85AQ96PX6 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC85AQ96PX6 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC85AQ96PX6 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC85AQ96PX6 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC85AQ96PX6 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CCDC85AQ96PX6 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC19.35■□□□□ 0.69
CCDC85AQ96PX6 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 AC022188.1-201ENST00000620960 1664 ntBASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 ZBTB12BP-201ENST00000314232 1122 ntBASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 MIR1908-201ENST00000410394 80 ntBASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 PACS1-203ENST00000524815 628 ntTSL 4 BASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 RN7SL219P-201ENST00000582872 296 ntBASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 AC093813.1-201ENST00000605066 256 ntBASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 MFF-204ENST00000353339 2186 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CCDC85AQ96PX6 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC85AQ96PX6 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC85AQ96PX6 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC85AQ96PX6 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC85AQ96PX6 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
CCDC85AQ96PX6 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
CCDC85AQ96PX6 GAPDHP40-201ENST00000505218 1006 ntBASIC19.33■□□□□ 0.68
CCDC85AQ96PX6 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
CCDC85AQ96PX6 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC85AQ96PX6 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC19.33■□□□□ 0.68
CCDC85AQ96PX6 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC19.33■□□□□ 0.68
CCDC85AQ96PX6 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC19.33■□□□□ 0.68
CCDC85AQ96PX6 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC85AQ96PX6 TECR-220ENST00000600083 1204 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC85AQ96PX6 AC009542.2-202ENST00000619004 1067 ntBASIC19.33■□□□□ 0.68
CCDC85AQ96PX6 GPR182-203ENST00000622922 591 ntBASIC19.33■□□□□ 0.68
CCDC85AQ96PX6 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.68
CCDC85AQ96PX6 AC009090.5-201ENST00000624886 2285 ntBASIC19.33■□□□□ 0.68
CCDC85AQ96PX6 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC85AQ96PX6 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC19.33■□□□□ 0.68
CCDC85AQ96PX6 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC19.33■□□□□ 0.68
CCDC85AQ96PX6 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC85AQ96PX6 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.33■□□□□ 0.68
CCDC85AQ96PX6 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC85AQ96PX6 AL138799.1-201ENST00000448213 1675 ntBASIC19.33■□□□□ 0.68
CCDC85AQ96PX6 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
CCDC85AQ96PX6 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
CCDC85AQ96PX6 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC19.33■□□□□ 0.68
CCDC85AQ96PX6 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
CCDC85AQ96PX6 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms