Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 RBM17P3-201ENST00000417687 1192 ntBASIC11.94□□□□□ -0.5
AP1S3Q96PC3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 AC116407.4-201ENST00000623319 1061 ntBASIC11.94□□□□□ -0.5
AP1S3Q96PC3 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 PBX1-203ENST00000420696 6636 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 LINC00528-201ENST00000600723 2160 ntBASIC11.94□□□□□ -0.5
AP1S3Q96PC3 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 HDAC2-205ENST00000519065 9874 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 BET1L-206ENST00000486280 665 ntTSL 3 BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 FAM86EP-206ENST00000510506 987 ntBASIC11.93□□□□□ -0.5
AP1S3Q96PC3 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 AP001269.4-201ENST00000609611 512 ntBASIC11.93□□□□□ -0.5
AP1S3Q96PC3 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 CNTNAP5-202ENST00000431078 5284 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 PRKAB2-201ENST00000254101 5417 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 TPO-203ENST00000346956 2923 ntTSL 5 BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC11.93□□□□□ -0.5
AP1S3Q96PC3 IER3-202ENST00000376377 1350 ntBASIC11.92□□□□□ -0.5
AP1S3Q96PC3 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 TBX3-201ENST00000257566 4208 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 USP31-203ENST00000567975 2142 ntTSL 2 BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC11.92□□□□□ -0.5
AP1S3Q96PC3 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms