Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 LINC02447-202ENST00000501888 2146 ntBASIC12.76□□□□□ -0.37
ZNF48Q96MX3 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZNF48Q96MX3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 KRT8P22-201ENST00000562317 1415 ntBASIC12.75□□□□□ -0.37
ZNF48Q96MX3 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 AL359711.2-201ENST00000563105 872 ntBASIC12.75□□□□□ -0.37
ZNF48Q96MX3 AP005482.1-201ENST00000563722 1273 ntBASIC12.75□□□□□ -0.37
ZNF48Q96MX3 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 PIGL-212ENST00000581006 554 ntTSL 4 BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 AC133539.2-201ENST00000604757 467 ntBASIC12.75□□□□□ -0.37
ZNF48Q96MX3 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 AC112504.1-201ENST00000623415 1841 ntBASIC12.75□□□□□ -0.37
ZNF48Q96MX3 AC134407.2-201ENST00000625089 1978 ntBASIC12.75□□□□□ -0.37
ZNF48Q96MX3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZNF48Q96MX3 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 AMT-232ENST00000636199 1546 ntTSL 5 BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZNF48Q96MX3 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms