Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNKSR1Q969H4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNKSR1Q969H4 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.91■□□□□ 0.62
CNKSR1Q969H4 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNKSR1Q969H4 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC18.91■□□□□ 0.62
CNKSR1Q969H4 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNKSR1Q969H4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNKSR1Q969H4 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
CNKSR1Q969H4 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CNKSR1Q969H4 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNKSR1Q969H4 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CNKSR1Q969H4 TNRC18P3-201ENST00000441896 2691 ntBASIC18.9■□□□□ 0.62
CNKSR1Q969H4 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
CNKSR1Q969H4 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNKSR1Q969H4 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
CNKSR1Q969H4 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNKSR1Q969H4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CNKSR1Q969H4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CNKSR1Q969H4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNKSR1Q969H4 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
CNKSR1Q969H4 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CNKSR1Q969H4 AL596276.2-201ENST00000447525 331 ntBASIC18.9■□□□□ 0.62
CNKSR1Q969H4 AC008267.1-201ENST00000474858 1069 ntBASIC18.9■□□□□ 0.62
CNKSR1Q969H4 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC18.9■□□□□ 0.62
CNKSR1Q969H4 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC18.9■□□□□ 0.62
CNKSR1Q969H4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNKSR1Q969H4 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNKSR1Q969H4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.9■□□□□ 0.62
CNKSR1Q969H4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
CNKSR1Q969H4 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNKSR1Q969H4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNKSR1Q969H4 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNKSR1Q969H4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CNKSR1Q969H4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.9■□□□□ 0.62
CNKSR1Q969H4 AC092171.3-201ENST00000610122 2651 ntBASIC18.9■□□□□ 0.62
CNKSR1Q969H4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CNKSR1Q969H4 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNKSR1Q969H4 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CNKSR1Q969H4 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNKSR1Q969H4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CNKSR1Q969H4 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNKSR1Q969H4 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNKSR1Q969H4 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CNKSR1Q969H4 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CNKSR1Q969H4 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
CNKSR1Q969H4 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.62
CNKSR1Q969H4 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNKSR1Q969H4 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CNKSR1Q969H4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CNKSR1Q969H4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNKSR1Q969H4 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNKSR1Q969H4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CNKSR1Q969H4 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNKSR1Q969H4 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC18.89■□□□□ 0.61
CNKSR1Q969H4 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNKSR1Q969H4 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC18.89■□□□□ 0.61
CNKSR1Q969H4 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CNKSR1Q969H4 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CNKSR1Q969H4 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CNKSR1Q969H4 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNKSR1Q969H4 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CNKSR1Q969H4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC18.89■□□□□ 0.61
CNKSR1Q969H4 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC18.89■□□□□ 0.61
CNKSR1Q969H4 AC012618.1-201ENST00000461223 412 ntBASIC18.89■□□□□ 0.61
CNKSR1Q969H4 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNKSR1Q969H4 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CNKSR1Q969H4 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC18.89■□□□□ 0.61
CNKSR1Q969H4 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC18.89■□□□□ 0.61
CNKSR1Q969H4 BNIP3P13-201ENST00000599968 566 ntBASIC18.89■□□□□ 0.61
CNKSR1Q969H4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNKSR1Q969H4 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNKSR1Q969H4 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CNKSR1Q969H4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CNKSR1Q969H4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CNKSR1Q969H4 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
CNKSR1Q969H4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CNKSR1Q969H4 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
CNKSR1Q969H4 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC18.88■□□□□ 0.61
CNKSR1Q969H4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNKSR1Q969H4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.88■□□□□ 0.61
CNKSR1Q969H4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CNKSR1Q969H4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CNKSR1Q969H4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CNKSR1Q969H4 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.88■□□□□ 0.61
CNKSR1Q969H4 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC18.88■□□□□ 0.61
CNKSR1Q969H4 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CNKSR1Q969H4 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNKSR1Q969H4 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNKSR1Q969H4 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNKSR1Q969H4 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNKSR1Q969H4 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CNKSR1Q969H4 ACTG1P2-201ENST00000415776 1125 ntBASIC18.88■□□□□ 0.61
CNKSR1Q969H4 ACTG1P11-201ENST00000425411 1125 ntBASIC18.88■□□□□ 0.61
CNKSR1Q969H4 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CNKSR1Q969H4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.88■□□□□ 0.61
CNKSR1Q969H4 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC18.88■□□□□ 0.61
CNKSR1Q969H4 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC18.88■□□□□ 0.61
CNKSR1Q969H4 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CNKSR1Q969H4 EID1-202ENST00000560490 584 ntTSL 3 BASIC18.88■□□□□ 0.61
CNKSR1Q969H4 SYT17-208ENST00000568433 812 ntTSL 3 BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms