Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF4Q92544 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TM9SF4Q92544 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.84□□□□□ -0.03
TM9SF4Q92544 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.84□□□□□ -0.03
TM9SF4Q92544 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.84□□□□□ -0.03
TM9SF4Q92544 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF4Q92544 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.84□□□□□ -0.03
TM9SF4Q92544 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.84□□□□□ -0.03
TM9SF4Q92544 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.84□□□□□ -0.03
TM9SF4Q92544 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.84□□□□□ -0.03
TM9SF4Q92544 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC14.84□□□□□ -0.03
TM9SF4Q92544 AC093726.1-201ENST00000608064 963 ntBASIC14.84□□□□□ -0.03
TM9SF4Q92544 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.84□□□□□ -0.03
TM9SF4Q92544 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.84□□□□□ -0.03
TM9SF4Q92544 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC14.84□□□□□ -0.03
TM9SF4Q92544 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF4Q92544 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
TM9SF4Q92544 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TM9SF4Q92544 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF4Q92544 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF4Q92544 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TM9SF4Q92544 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TM9SF4Q92544 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF4Q92544 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.84□□□□□ -0.03
TM9SF4Q92544 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.84□□□□□ -0.03
TM9SF4Q92544 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF4Q92544 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF4Q92544 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF4Q92544 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF4Q92544 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF4Q92544 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF4Q92544 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TM9SF4Q92544 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.83□□□□□ -0.03
TM9SF4Q92544 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
TM9SF4Q92544 LINC01144-201ENST00000626198 1710 ntBASIC14.83□□□□□ -0.03
TM9SF4Q92544 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
TM9SF4Q92544 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
TM9SF4Q92544 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.83□□□□□ -0.03
TM9SF4Q92544 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.83□□□□□ -0.03
TM9SF4Q92544 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
TM9SF4Q92544 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TM9SF4Q92544 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.83□□□□□ -0.03
TM9SF4Q92544 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TM9SF4Q92544 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
TM9SF4Q92544 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.83□□□□□ -0.04
TM9SF4Q92544 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TM9SF4Q92544 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF4Q92544 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF4Q92544 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
TM9SF4Q92544 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
TM9SF4Q92544 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF4Q92544 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF4Q92544 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF4Q92544 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF4Q92544 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF4Q92544 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC14.83□□□□□ -0.04
TM9SF4Q92544 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF4Q92544 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF4Q92544 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF4Q92544 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF4Q92544 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF4Q92544 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF4Q92544 FO393414.2-201ENST00000405153 598 ntBASIC14.83□□□□□ -0.04
TM9SF4Q92544 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF4Q92544 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
TM9SF4Q92544 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.83□□□□□ -0.04
TM9SF4Q92544 MYCLP2-201ENST00000449268 967 ntBASIC14.83□□□□□ -0.04
TM9SF4Q92544 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.83□□□□□ -0.04
TM9SF4Q92544 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF4Q92544 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC14.83□□□□□ -0.04
TM9SF4Q92544 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.83□□□□□ -0.04
TM9SF4Q92544 AC104596.2-201ENST00000512793 793 ntBASIC14.83□□□□□ -0.04
TM9SF4Q92544 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
TM9SF4Q92544 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.83□□□□□ -0.04
TM9SF4Q92544 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.83□□□□□ -0.04
TM9SF4Q92544 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.83□□□□□ -0.04
TM9SF4Q92544 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.83□□□□□ -0.04
TM9SF4Q92544 IFT20-216ENST00000588477 774 ntTSL 5 BASIC14.83□□□□□ -0.04
TM9SF4Q92544 AC074044.1-201ENST00000609673 707 ntBASIC14.83□□□□□ -0.04
TM9SF4Q92544 MIR6805-201ENST00000615055 62 ntBASIC14.83□□□□□ -0.04
TM9SF4Q92544 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.83□□□□□ -0.04
TM9SF4Q92544 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.83□□□□□ -0.04
TM9SF4Q92544 AC004461.2-201ENST00000629517 803 ntBASIC14.83□□□□□ -0.04
TM9SF4Q92544 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF4Q92544 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF4Q92544 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF4Q92544 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF4Q92544 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF4Q92544 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.83□□□□□ -0.04
TM9SF4Q92544 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TM9SF4Q92544 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TM9SF4Q92544 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
TM9SF4Q92544 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TM9SF4Q92544 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC14.82□□□□□ -0.04
TM9SF4Q92544 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.82□□□□□ -0.04
TM9SF4Q92544 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TM9SF4Q92544 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.82□□□□□ -0.04
TM9SF4Q92544 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TM9SF4Q92544 PCGF3-213ENST00000620529 1899 ntBASIC14.82□□□□□ -0.04
TM9SF4Q92544 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms