Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHC3Q92529 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SHC3Q92529 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHC3Q92529 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SHC3Q92529 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SHC3Q92529 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SHC3Q92529 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.66■□□□□ 0.26
SHC3Q92529 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SHC3Q92529 SPDYE18-201ENST00000510091 1050 ntBASIC16.66■□□□□ 0.26
SHC3Q92529 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.66■□□□□ 0.26
SHC3Q92529 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHC3Q92529 RFPL4AP1-201ENST00000530883 850 ntBASIC16.66■□□□□ 0.26
SHC3Q92529 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SHC3Q92529 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.66■□□□□ 0.26
SHC3Q92529 AC022144.1-201ENST00000602255 1580 ntBASIC16.66■□□□□ 0.26
SHC3Q92529 AC025181.2-201ENST00000606994 802 ntBASIC16.66■□□□□ 0.26
SHC3Q92529 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.66■□□□□ 0.26
SHC3Q92529 AC106028.4-201ENST00000614509 607 ntBASIC16.66■□□□□ 0.26
SHC3Q92529 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SHC3Q92529 AC004840.1-201ENST00000636359 365 ntBASIC16.66■□□□□ 0.26
SHC3Q92529 AL645728.2-202ENST00000641679 227 ntBASIC16.66■□□□□ 0.26
SHC3Q92529 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHC3Q92529 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHC3Q92529 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHC3Q92529 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHC3Q92529 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.66■□□□□ 0.26
SHC3Q92529 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHC3Q92529 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHC3Q92529 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHC3Q92529 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SHC3Q92529 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.66■□□□□ 0.26
SHC3Q92529 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SHC3Q92529 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.66■□□□□ 0.26
SHC3Q92529 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHC3Q92529 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SHC3Q92529 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHC3Q92529 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHC3Q92529 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SHC3Q92529 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.65■□□□□ 0.26
SHC3Q92529 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
SHC3Q92529 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHC3Q92529 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SHC3Q92529 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.65■□□□□ 0.26
SHC3Q92529 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SHC3Q92529 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SHC3Q92529 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHC3Q92529 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHC3Q92529 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SHC3Q92529 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.65■□□□□ 0.26
SHC3Q92529 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHC3Q92529 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHC3Q92529 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.65■□□□□ 0.26
SHC3Q92529 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.65■□□□□ 0.26
SHC3Q92529 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.65■□□□□ 0.26
SHC3Q92529 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.65■□□□□ 0.26
SHC3Q92529 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHC3Q92529 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.65■□□□□ 0.26
SHC3Q92529 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.65■□□□□ 0.26
SHC3Q92529 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.65■□□□□ 0.26
SHC3Q92529 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.65■□□□□ 0.26
SHC3Q92529 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
SHC3Q92529 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.65■□□□□ 0.26
SHC3Q92529 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHC3Q92529 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHC3Q92529 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHC3Q92529 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHC3Q92529 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHC3Q92529 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SHC3Q92529 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.65■□□□□ 0.26
SHC3Q92529 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SHC3Q92529 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SHC3Q92529 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
SHC3Q92529 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SHC3Q92529 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
SHC3Q92529 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.64■□□□□ 0.25
SHC3Q92529 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHC3Q92529 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.64■□□□□ 0.25
SHC3Q92529 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SHC3Q92529 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SHC3Q92529 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHC3Q92529 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SHC3Q92529 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SHC3Q92529 AC104457.1-201ENST00000401024 814 ntBASIC16.64■□□□□ 0.25
SHC3Q92529 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SHC3Q92529 MRPS18AP1-201ENST00000414458 589 ntBASIC16.64■□□□□ 0.25
SHC3Q92529 AL589987.1-201ENST00000453380 819 ntBASIC16.64■□□□□ 0.25
SHC3Q92529 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.64■□□□□ 0.25
SHC3Q92529 AC005498.2-205ENST00000593218 784 ntBASIC16.64■□□□□ 0.25
SHC3Q92529 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHC3Q92529 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC16.64■□□□□ 0.25
SHC3Q92529 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.64■□□□□ 0.25
SHC3Q92529 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHC3Q92529 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHC3Q92529 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SHC3Q92529 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.64■□□□□ 0.25
SHC3Q92529 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.64■□□□□ 0.25
SHC3Q92529 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.64■□□□□ 0.25
SHC3Q92529 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SHC3Q92529 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SHC3Q92529 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms