Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
ALMS1Q8TCU4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 AC018463.1-201ENST00000456674 917 ntBASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 HNRNPA1P36-201ENST00000521313 955 ntBASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 AC026803.1-201ENST00000569130 274 ntBASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 AP001527.2-201ENST00000614441 631 ntBASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 SLC25A19-205ENST00000442286 1496 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 RN7SKP230-201ENST00000365642 335 ntBASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 AL132780.4-201ENST00000624870 1135 ntBASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 LYPLA2P1-203ENST00000447689 696 ntBASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 AP000593.2-201ENST00000542775 1433 ntBASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 ME2P1-201ENST00000426028 1970 ntBASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
ALMS1Q8TCU4 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 NCR3-202ENST00000376071 541 ntTSL 5 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 HIST2H2BF-204ENST00000545683 999 ntTSL 2 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 LINC01165-201ENST00000445190 1623 ntBASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 AC136759.1-202ENST00000530858 2194 ntBASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 AC106886.4-201ENST00000623557 2502 ntBASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 AMT-239ENST00000636865 1914 ntTSL 5 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 AL512306.1-201ENST00000432698 848 ntBASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC10.22□□□□□ -0.77
ALMS1Q8TCU4 POLD4-208ENST00000532830 904 ntTSL 3 BASIC10.22□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms