Protein–RNA interactions for Protein: Q8TBE3

FNDC9, Fibronectin type III domain-containing protein 9, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC9Q8TBE3 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 SLC7A15P-201ENST00000424028 1363 ntBASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 AL391825.1-201ENST00000457671 1364 ntBASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 AC087499.6-201ENST00000411576 835 ntBASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 AC136604.1-201ENST00000418535 575 ntBASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 MEP1AP4-201ENST00000423244 1087 ntBASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 RPL13P2-201ENST00000440687 659 ntBASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 AP005018.1-201ENST00000525475 301 ntBASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 AC055876.2-201ENST00000531834 546 ntBASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 AC140912.1-201ENST00000577171 1054 ntBASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 AC025048.6-201ENST00000634326 1161 ntBASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 AC010491.1-201ENST00000563101 2797 ntBASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
FNDC9Q8TBE3 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 EDF1-203ENST00000371649 790 ntTSL 2 BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 MEIS3P1-201ENST00000495167 958 ntBASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 TP53TG3HP-202ENST00000569755 579 ntBASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 CHCHD2P3-201ENST00000603038 451 ntBASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 AL607033.1-201ENST00000623900 1599 ntBASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
FNDC9Q8TBE3 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms