Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.68□□□□□ -0.06
NUP43Q8NFH3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
NUP43Q8NFH3 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NUP43Q8NFH3 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NUP43Q8NFH3 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NUP43Q8NFH3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NUP43Q8NFH3 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NUP43Q8NFH3 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NUP43Q8NFH3 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NUP43Q8NFH3 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NUP43Q8NFH3 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 CENPM-205ENST00000404067 905 ntTSL 3 BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 AC074338.1-201ENST00000416825 156 ntBASIC14.67□□□□□ -0.06
NUP43Q8NFH3 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 FAM86GP-201ENST00000448322 971 ntBASIC14.67□□□□□ -0.06
NUP43Q8NFH3 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 RN7SL618P-201ENST00000477850 296 ntBASIC14.67□□□□□ -0.06
NUP43Q8NFH3 SLED1-202ENST00000512051 380 ntBASIC14.67□□□□□ -0.06
NUP43Q8NFH3 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 AL512361.1-201ENST00000554200 418 ntBASIC14.67□□□□□ -0.06
NUP43Q8NFH3 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NUP43Q8NFH3 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 KRT8P44-201ENST00000441609 1350 ntBASIC14.66□□□□□ -0.06
NUP43Q8NFH3 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 METTL21AP1-201ENST00000438852 635 ntBASIC14.66□□□□□ -0.06
NUP43Q8NFH3 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 PCDHA3-202ENST00000532566 4594 ntBASIC14.66□□□□□ -0.06
NUP43Q8NFH3 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.66□□□□□ -0.06
NUP43Q8NFH3 AC126365.1-201ENST00000578585 1514 ntBASIC14.66□□□□□ -0.06
NUP43Q8NFH3 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms