Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 RPL13P2-201ENST00000440687 659 ntBASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 ELP6-209ENST00000446787 894 ntTSL 3 BASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 C2orf69P2-201ENST00000562032 1123 ntBASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 AC124283.3-201ENST00000570869 594 ntBASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 AL118558.3-201ENST00000607414 1079 ntBASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 AL022328.3-201ENST00000607943 679 ntBASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 AL391005.1-201ENST00000623953 2435 ntBASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 ME2P1-201ENST00000426028 1970 ntBASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
ZNF248Q8NDW4 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 AC134312.5-201ENST00000568031 1313 ntBASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 C1QBPP1-201ENST00000400117 770 ntBASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 CALR4P-201ENST00000431943 946 ntBASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 ARTN-209ENST00000479128 471 ntTSL 3 BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 RNA5SP423-201ENST00000517127 109 ntBASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 AL031731.1-201ENST00000642131 2094 ntBASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 U82695.1-201ENST00000635752 1889 ntBASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF248Q8NDW4 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms