Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ARHGEF39Q8N4T4 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ARHGEF39Q8N4T4 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.69□□□□□ -0.06
ARHGEF39Q8N4T4 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
ARHGEF39Q8N4T4 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
ARHGEF39Q8N4T4 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
ARHGEF39Q8N4T4 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ARHGEF39Q8N4T4 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ARHGEF39Q8N4T4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
ARHGEF39Q8N4T4 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.69□□□□□ -0.06
ARHGEF39Q8N4T4 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ARHGEF39Q8N4T4 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
ARHGEF39Q8N4T4 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
ARHGEF39Q8N4T4 LTF-203ENST00000426532 2494 ntTSL 2 BASIC14.69□□□□□ -0.06
ARHGEF39Q8N4T4 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ARHGEF39Q8N4T4 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.69□□□□□ -0.06
ARHGEF39Q8N4T4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
ARHGEF39Q8N4T4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
ARHGEF39Q8N4T4 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 CU634019.7-201ENST00000624153 1185 ntBASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 FP236241.2-201ENST00000624906 1185 ntBASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 AL138799.1-201ENST00000448213 1675 ntBASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
ARHGEF39Q8N4T4 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ARHGEF39Q8N4T4 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ARHGEF39Q8N4T4 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ARHGEF39Q8N4T4 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ARHGEF39Q8N4T4 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
ARHGEF39Q8N4T4 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.67□□□□□ -0.06
ARHGEF39Q8N4T4 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ARHGEF39Q8N4T4 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.67□□□□□ -0.06
ARHGEF39Q8N4T4 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
ARHGEF39Q8N4T4 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.67□□□□□ -0.06
ARHGEF39Q8N4T4 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ARHGEF39Q8N4T4 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ARHGEF39Q8N4T4 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
ARHGEF39Q8N4T4 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ARHGEF39Q8N4T4 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
ARHGEF39Q8N4T4 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.67□□□□□ -0.06
ARHGEF39Q8N4T4 TMEM14DP-201ENST00000422205 345 ntBASIC14.67□□□□□ -0.06
ARHGEF39Q8N4T4 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
ARHGEF39Q8N4T4 ACTG1P3-201ENST00000431775 1114 ntBASIC14.67□□□□□ -0.06
ARHGEF39Q8N4T4 U91328.1-201ENST00000437528 223 ntBASIC14.67□□□□□ -0.06
ARHGEF39Q8N4T4 GIMAP3P-201ENST00000495150 836 ntBASIC14.67□□□□□ -0.06
ARHGEF39Q8N4T4 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.67□□□□□ -0.06
ARHGEF39Q8N4T4 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
ARHGEF39Q8N4T4 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms