Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS52Q8N1B4 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS52Q8N1B4 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.03■□□□□ 0.32
VPS52Q8N1B4 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC17.03■□□□□ 0.32
VPS52Q8N1B4 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.03■□□□□ 0.32
VPS52Q8N1B4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VPS52Q8N1B4 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.03■□□□□ 0.32
VPS52Q8N1B4 AC243562.2-201ENST00000561247 970 ntBASIC17.03■□□□□ 0.32
VPS52Q8N1B4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC17.03■□□□□ 0.32
VPS52Q8N1B4 BTNL10-201ENST00000595971 695 ntBASIC17.03■□□□□ 0.32
VPS52Q8N1B4 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
VPS52Q8N1B4 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS52Q8N1B4 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
VPS52Q8N1B4 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS52Q8N1B4 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC17.03■□□□□ 0.32
VPS52Q8N1B4 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.03■□□□□ 0.32
VPS52Q8N1B4 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC17.03■□□□□ 0.32
VPS52Q8N1B4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS52Q8N1B4 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS52Q8N1B4 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VPS52Q8N1B4 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VPS52Q8N1B4 AC105917.1-201ENST00000506637 2539 ntBASIC17.03■□□□□ 0.32
VPS52Q8N1B4 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC17.03■□□□□ 0.32
VPS52Q8N1B4 KRT8P37-201ENST00000451609 1420 ntBASIC17.03■□□□□ 0.32
VPS52Q8N1B4 AC067930.6-201ENST00000623257 4947 ntBASIC17.03■□□□□ 0.32
VPS52Q8N1B4 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VPS52Q8N1B4 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.03■□□□□ 0.32
VPS52Q8N1B4 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VPS52Q8N1B4 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VPS52Q8N1B4 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
VPS52Q8N1B4 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VPS52Q8N1B4 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC17.02■□□□□ 0.32
VPS52Q8N1B4 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VPS52Q8N1B4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.02■□□□□ 0.32
VPS52Q8N1B4 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
VPS52Q8N1B4 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
VPS52Q8N1B4 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.02■□□□□ 0.32
VPS52Q8N1B4 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
VPS52Q8N1B4 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
VPS52Q8N1B4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VPS52Q8N1B4 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
VPS52Q8N1B4 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
VPS52Q8N1B4 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC17.02■□□□□ 0.32
VPS52Q8N1B4 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
VPS52Q8N1B4 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VPS52Q8N1B4 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VPS52Q8N1B4 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
VPS52Q8N1B4 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC17.02■□□□□ 0.32
VPS52Q8N1B4 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC17.02■□□□□ 0.32
VPS52Q8N1B4 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.02■□□□□ 0.32
VPS52Q8N1B4 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC17.02■□□□□ 0.32
VPS52Q8N1B4 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC17.02■□□□□ 0.32
VPS52Q8N1B4 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VPS52Q8N1B4 AL391069.4-201ENST00000609583 481 ntBASIC17.02■□□□□ 0.32
VPS52Q8N1B4 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC17.02■□□□□ 0.32
VPS52Q8N1B4 AL158212.4-201ENST00000624062 1286 ntBASIC17.02■□□□□ 0.32
VPS52Q8N1B4 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
VPS52Q8N1B4 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
VPS52Q8N1B4 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VPS52Q8N1B4 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
VPS52Q8N1B4 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VPS52Q8N1B4 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VPS52Q8N1B4 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VPS52Q8N1B4 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC17.02■□□□□ 0.31
VPS52Q8N1B4 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VPS52Q8N1B4 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VPS52Q8N1B4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
VPS52Q8N1B4 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.02■□□□□ 0.31
VPS52Q8N1B4 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC17.02■□□□□ 0.31
VPS52Q8N1B4 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 BOLA2P3-201ENST00000404566 256 ntBASIC17.01■□□□□ 0.31
VPS52Q8N1B4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 RPL13P2-201ENST00000440687 659 ntBASIC17.01■□□□□ 0.31
VPS52Q8N1B4 EEF1DP4-201ENST00000446006 880 ntBASIC17.01■□□□□ 0.31
VPS52Q8N1B4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 AC092658.1-201ENST00000505836 891 ntBASIC17.01■□□□□ 0.31
VPS52Q8N1B4 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 AL033527.4-201ENST00000641026 673 ntBASIC17.01■□□□□ 0.31
VPS52Q8N1B4 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VPS52Q8N1B4 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms