Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.36□□□□□ -0.11
COL27A1Q8IZC6 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
COL27A1Q8IZC6 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.36□□□□□ -0.11
COL27A1Q8IZC6 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL27A1Q8IZC6 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COL27A1Q8IZC6 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC14.36□□□□□ -0.11
COL27A1Q8IZC6 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC14.36□□□□□ -0.11
COL27A1Q8IZC6 KRT18P36-201ENST00000411618 1276 ntBASIC14.36□□□□□ -0.11
COL27A1Q8IZC6 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COL27A1Q8IZC6 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.36□□□□□ -0.11
COL27A1Q8IZC6 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.36□□□□□ -0.11
COL27A1Q8IZC6 RN7SL555P-201ENST00000584742 339 ntBASIC14.36□□□□□ -0.11
COL27A1Q8IZC6 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL27A1Q8IZC6 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL27A1Q8IZC6 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL27A1Q8IZC6 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL27A1Q8IZC6 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.36□□□□□ -0.11
COL27A1Q8IZC6 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC14.36□□□□□ -0.11
COL27A1Q8IZC6 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
COL27A1Q8IZC6 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL27A1Q8IZC6 KRT8P29-201ENST00000420409 1371 ntBASIC14.36□□□□□ -0.11
COL27A1Q8IZC6 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COL27A1Q8IZC6 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL27A1Q8IZC6 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.36□□□□□ -0.11
COL27A1Q8IZC6 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC14.36□□□□□ -0.11
COL27A1Q8IZC6 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
COL27A1Q8IZC6 AC092127.1-201ENST00000567093 3455 ntBASIC14.36□□□□□ -0.11
COL27A1Q8IZC6 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC14.36□□□□□ -0.11
COL27A1Q8IZC6 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
COL27A1Q8IZC6 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 RN7SKP230-201ENST00000365642 335 ntBASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 AC244394.1-201ENST00000435000 1665 ntBASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 AL008707.1-201ENST00000422498 534 ntBASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 AC073150.1-201ENST00000450406 1084 ntBASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 AC012618.1-201ENST00000461223 412 ntBASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 E2F3P2-201ENST00000447755 1422 ntBASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
COL27A1Q8IZC6 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 AL353637.1-201ENST00000451571 732 ntBASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 MPRIPP1-201ENST00000452433 1089 ntBASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC14.34□□□□□ -0.11
COL27A1Q8IZC6 RCC2P8-201ENST00000502779 1035 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms