Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
CCDC116Q8IYX3 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 AC126755.1-201ENST00000525846 6405 ntBASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 RN7SL618P-201ENST00000477850 296 ntBASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
CCDC116Q8IYX3 AC138035.3-201ENST00000622706 2791 ntBASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 AL645939.2-201ENST00000427340 991 ntBASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 IGHV3-42-201ENST00000520410 361 ntBASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 Z97205.2-201ENST00000564697 1639 ntBASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 ADAM3B-201ENST00000569937 840 ntBASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 AC025048.3-201ENST00000590609 569 ntBASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
CCDC116Q8IYX3 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms