Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 AL591846.1-201ENST00000451736 433 ntBASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 ACR-203ENST00000529621 708 ntTSL 5 BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 AC124067.4-201ENST00000519691 2379 ntBASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 PGR-209ENST00000617858 2816 ntTSL 5 BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
TMEFF1Q8IYR6 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 KRT8P35-201ENST00000483942 1338 ntBASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 GRN-222ENST00000639447 1314 ntTSL 2 BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 AL133267.1-201ENST00000398220 340 ntBASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 HOMER2P2-201ENST00000451621 847 ntBASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 ACTG1P17-201ENST00000558391 1119 ntBASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 AC005695.3-201ENST00000614522 232 ntBASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 AC132938.4-201ENST00000623835 848 ntBASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 RETN-203ENST00000629642 400 ntTSL 5 BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 AC244452.3-201ENST00000636814 210 ntBASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 AL138709.1-201ENST00000614840 1693 ntBASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
TMEFF1Q8IYR6 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC15.46■□□□□ 0.07
TMEFF1Q8IYR6 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms