Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 SOCS2P1-201ENST00000417727 557 ntBASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 GPR53P-205ENST00000457298 1084 ntBASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 HILS1-202ENST00000545329 423 ntBASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 ABBA01031660.1-201ENST00000635219 756 ntBASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 AL139384.1-201ENST00000612143 3047 ntBASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
SCN4BQ8IWT1 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCN4BQ8IWT1 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.47■□□□□ 0.23
SCN4BQ8IWT1 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCN4BQ8IWT1 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCN4BQ8IWT1 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCN4BQ8IWT1 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.47■□□□□ 0.23
SCN4BQ8IWT1 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCN4BQ8IWT1 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCN4BQ8IWT1 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCN4BQ8IWT1 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCN4BQ8IWT1 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SCN4BQ8IWT1 AC026691.1-201ENST00000602502 2017 ntBASIC16.47■□□□□ 0.23
SCN4BQ8IWT1 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SCN4BQ8IWT1 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCN4BQ8IWT1 AC092127.1-201ENST00000567093 3455 ntBASIC16.47■□□□□ 0.23
SCN4BQ8IWT1 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC16.47■□□□□ 0.23
SCN4BQ8IWT1 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.47■□□□□ 0.23
SCN4BQ8IWT1 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
SCN4BQ8IWT1 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
SCN4BQ8IWT1 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
SCN4BQ8IWT1 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.47■□□□□ 0.23
SCN4BQ8IWT1 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.47■□□□□ 0.23
SCN4BQ8IWT1 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.47■□□□□ 0.23
SCN4BQ8IWT1 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
SCN4BQ8IWT1 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCN4BQ8IWT1 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCN4BQ8IWT1 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCN4BQ8IWT1 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.47■□□□□ 0.23
SCN4BQ8IWT1 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCN4BQ8IWT1 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.47■□□□□ 0.23
SCN4BQ8IWT1 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCN4BQ8IWT1 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCN4BQ8IWT1 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
SCN4BQ8IWT1 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
SCN4BQ8IWT1 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SCN4BQ8IWT1 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SCN4BQ8IWT1 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCN4BQ8IWT1 NORAD-201ENST00000565493 5339 ntBASIC16.46■□□□□ 0.23
SCN4BQ8IWT1 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCN4BQ8IWT1 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCN4BQ8IWT1 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.46■□□□□ 0.23
SCN4BQ8IWT1 CICP13-201ENST00000422015 2789 ntBASIC16.46■□□□□ 0.23
SCN4BQ8IWT1 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.46■□□□□ 0.23
SCN4BQ8IWT1 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCN4BQ8IWT1 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SCN4BQ8IWT1 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCN4BQ8IWT1 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCN4BQ8IWT1 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SCN4BQ8IWT1 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCN4BQ8IWT1 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SCN4BQ8IWT1 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.46■□□□□ 0.23
SCN4BQ8IWT1 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SCN4BQ8IWT1 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
SCN4BQ8IWT1 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.46■□□□□ 0.23
SCN4BQ8IWT1 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.46■□□□□ 0.23
SCN4BQ8IWT1 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC16.46■□□□□ 0.23
SCN4BQ8IWT1 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.46■□□□□ 0.23
SCN4BQ8IWT1 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.46■□□□□ 0.23
SCN4BQ8IWT1 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC16.46■□□□□ 0.23
SCN4BQ8IWT1 TDH-203ENST00000531764 1110 ntBASIC16.46■□□□□ 0.23
SCN4BQ8IWT1 KRT17P8-201ENST00000540749 863 ntBASIC16.46■□□□□ 0.23
SCN4BQ8IWT1 AC124283.3-201ENST00000570869 594 ntBASIC16.46■□□□□ 0.23
SCN4BQ8IWT1 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC16.46■□□□□ 0.23
SCN4BQ8IWT1 AC008735.3-201ENST00000596646 500 ntBASIC16.46■□□□□ 0.23
SCN4BQ8IWT1 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms