Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC19.29■□□□□ 0.68
COL23A1Q86Y22 GMFG-209ENST00000600322 622 ntTSL 5 BASIC19.29■□□□□ 0.68
COL23A1Q86Y22 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
COL23A1Q86Y22 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL23A1Q86Y22 AC092171.3-201ENST00000610122 2651 ntBASIC19.29■□□□□ 0.68
COL23A1Q86Y22 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL23A1Q86Y22 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC19.29■□□□□ 0.68
COL23A1Q86Y22 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL23A1Q86Y22 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL23A1Q86Y22 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL23A1Q86Y22 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL23A1Q86Y22 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL23A1Q86Y22 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL23A1Q86Y22 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL23A1Q86Y22 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL23A1Q86Y22 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC19.29■□□□□ 0.68
COL23A1Q86Y22 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL23A1Q86Y22 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COL23A1Q86Y22 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
COL23A1Q86Y22 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.28■□□□□ 0.68
COL23A1Q86Y22 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC19.28■□□□□ 0.68
COL23A1Q86Y22 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.28■□□□□ 0.68
COL23A1Q86Y22 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL23A1Q86Y22 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL23A1Q86Y22 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
COL23A1Q86Y22 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.28■□□□□ 0.68
COL23A1Q86Y22 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL23A1Q86Y22 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
COL23A1Q86Y22 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL23A1Q86Y22 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL23A1Q86Y22 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL23A1Q86Y22 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC19.28■□□□□ 0.68
COL23A1Q86Y22 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC19.28■□□□□ 0.68
COL23A1Q86Y22 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC19.28■□□□□ 0.68
COL23A1Q86Y22 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC19.28■□□□□ 0.68
COL23A1Q86Y22 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL23A1Q86Y22 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
COL23A1Q86Y22 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC19.28■□□□□ 0.68
COL23A1Q86Y22 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
COL23A1Q86Y22 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC19.28■□□□□ 0.68
COL23A1Q86Y22 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC19.28■□□□□ 0.68
COL23A1Q86Y22 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC19.28■□□□□ 0.68
COL23A1Q86Y22 AL358472.3-201ENST00000608147 415 ntBASIC19.28■□□□□ 0.68
COL23A1Q86Y22 AL136295.7-201ENST00000619226 1200 ntBASIC19.28■□□□□ 0.68
COL23A1Q86Y22 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC19.28■□□□□ 0.68
COL23A1Q86Y22 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL23A1Q86Y22 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL23A1Q86Y22 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL23A1Q86Y22 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.28■□□□□ 0.68
COL23A1Q86Y22 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.28■□□□□ 0.68
COL23A1Q86Y22 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
COL23A1Q86Y22 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.27■□□□□ 0.68
COL23A1Q86Y22 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL23A1Q86Y22 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC19.27■□□□□ 0.68
COL23A1Q86Y22 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL23A1Q86Y22 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
COL23A1Q86Y22 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL23A1Q86Y22 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL23A1Q86Y22 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL23A1Q86Y22 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL23A1Q86Y22 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL23A1Q86Y22 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
COL23A1Q86Y22 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL23A1Q86Y22 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
COL23A1Q86Y22 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
COL23A1Q86Y22 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC19.27■□□□□ 0.68
COL23A1Q86Y22 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL23A1Q86Y22 AL627231.1-201ENST00000394467 1125 ntBASIC19.27■□□□□ 0.68
COL23A1Q86Y22 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC19.27■□□□□ 0.68
COL23A1Q86Y22 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC19.27■□□□□ 0.68
COL23A1Q86Y22 MESTP3-201ENST00000503460 968 ntBASIC19.27■□□□□ 0.68
COL23A1Q86Y22 AC090857.1-201ENST00000527400 390 ntBASIC19.27■□□□□ 0.68
COL23A1Q86Y22 AC100827.2-201ENST00000563214 1194 ntBASIC19.27■□□□□ 0.68
COL23A1Q86Y22 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC19.27■□□□□ 0.68
COL23A1Q86Y22 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC19.27■□□□□ 0.68
COL23A1Q86Y22 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
COL23A1Q86Y22 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
COL23A1Q86Y22 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
COL23A1Q86Y22 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
COL23A1Q86Y22 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
COL23A1Q86Y22 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
COL23A1Q86Y22 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
COL23A1Q86Y22 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL23A1Q86Y22 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL23A1Q86Y22 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC19.26■□□□□ 0.67
COL23A1Q86Y22 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL23A1Q86Y22 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL23A1Q86Y22 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
COL23A1Q86Y22 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC19.26■□□□□ 0.67
COL23A1Q86Y22 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC19.26■□□□□ 0.67
COL23A1Q86Y22 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC19.26■□□□□ 0.67
COL23A1Q86Y22 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC19.26■□□□□ 0.67
COL23A1Q86Y22 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC19.26■□□□□ 0.67
COL23A1Q86Y22 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
COL23A1Q86Y22 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC19.26■□□□□ 0.67
COL23A1Q86Y22 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC19.26■□□□□ 0.67
COL23A1Q86Y22 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC19.26■□□□□ 0.67
COL23A1Q86Y22 IRF3-215ENST00000596822 823 ntTSL 3 BASIC19.26■□□□□ 0.67
COL23A1Q86Y22 AL132994.2-201ENST00000603120 687 ntBASIC19.26■□□□□ 0.67
COL23A1Q86Y22 AC007718.1-201ENST00000621078 280 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms