Protein–RNA interactions for Protein: Q7Z408

CSMD2, CUB and sushi domain-containing protein 2, humanhuman

Predictions only

Length 3,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2Q7Z408 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD2Q7Z408 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD2Q7Z408 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CSMD2Q7Z408 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD2Q7Z408 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD2Q7Z408 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD2Q7Z408 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC12.87□□□□□ -0.35
CSMD2Q7Z408 AC114812.1-204ENST00000449669 728 ntBASIC12.87□□□□□ -0.35
CSMD2Q7Z408 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC12.87□□□□□ -0.35
CSMD2Q7Z408 REEP5-205ENST00000504247 480 ntTSL 5 BASIC12.87□□□□□ -0.35
CSMD2Q7Z408 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC12.87□□□□□ -0.35
CSMD2Q7Z408 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.87□□□□□ -0.35
CSMD2Q7Z408 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC12.87□□□□□ -0.35
CSMD2Q7Z408 AC103810.10-201ENST00000606504 343 ntBASIC12.87□□□□□ -0.35
CSMD2Q7Z408 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC12.87□□□□□ -0.35
CSMD2Q7Z408 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD2Q7Z408 AP001282.1-201ENST00000531301 1499 ntBASIC12.87□□□□□ -0.35
CSMD2Q7Z408 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD2Q7Z408 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD2Q7Z408 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD2Q7Z408 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CSMD2Q7Z408 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CSMD2Q7Z408 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD2Q7Z408 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CSMD2Q7Z408 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.87□□□□□ -0.35
CSMD2Q7Z408 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC12.87□□□□□ -0.35
CSMD2Q7Z408 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC12.87□□□□□ -0.35
CSMD2Q7Z408 AGGF1P2-201ENST00000426656 2106 ntBASIC12.87□□□□□ -0.35
CSMD2Q7Z408 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC12.87□□□□□ -0.35
CSMD2Q7Z408 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 RPS15-201ENST00000233609 534 ntTSL 2 BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 RPS15-205ENST00000586686 562 ntTSL 5 BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 RPS15-208ENST00000591804 711 ntTSL 5 BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 AL450472.2-201ENST00000603663 1156 ntBASIC12.86□□□□□ -0.35
CSMD2Q7Z408 NAP1L6-202ENST00000641404 1222 ntBASIC12.86□□□□□ -0.35
CSMD2Q7Z408 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 E2F3P2-201ENST00000447755 1422 ntBASIC12.86□□□□□ -0.35
CSMD2Q7Z408 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 NOC2LP2-201ENST00000407594 1944 ntBASIC12.86□□□□□ -0.35
CSMD2Q7Z408 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 AC018463.1-201ENST00000456674 917 ntBASIC12.86□□□□□ -0.35
CSMD2Q7Z408 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 AC005632.3-201ENST00000605544 308 ntBASIC12.86□□□□□ -0.35
CSMD2Q7Z408 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CSMD2Q7Z408 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 OR10B1P-201ENST00000601666 907 ntBASIC12.85□□□□□ -0.35
CSMD2Q7Z408 AL132780.4-201ENST00000624870 1135 ntBASIC12.85□□□□□ -0.35
CSMD2Q7Z408 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.85□□□□□ -0.35
CSMD2Q7Z408 PHKG1P2-201ENST00000457537 863 ntBASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms