Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 KSR1-207ENST00000578981 748 ntTSL 4 BASIC19.4■□□□□ 0.7
UBE3BQ7Z3V4 GNRHR2-203ENST00000581100 1187 ntBASIC19.4■□□□□ 0.7
UBE3BQ7Z3V4 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE3BQ7Z3V4 AC244669.2-201ENST00000612320 853 ntBASIC19.4■□□□□ 0.7
UBE3BQ7Z3V4 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE3BQ7Z3V4 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBE3BQ7Z3V4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE3BQ7Z3V4 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
UBE3BQ7Z3V4 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE3BQ7Z3V4 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE3BQ7Z3V4 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE3BQ7Z3V4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
UBE3BQ7Z3V4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE3BQ7Z3V4 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
UBE3BQ7Z3V4 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
UBE3BQ7Z3V4 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
UBE3BQ7Z3V4 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
UBE3BQ7Z3V4 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
UBE3BQ7Z3V4 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBE3BQ7Z3V4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBE3BQ7Z3V4 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBE3BQ7Z3V4 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC19.39■□□□□ 0.69
UBE3BQ7Z3V4 BNIP3P42-201ENST00000454982 569 ntBASIC19.39■□□□□ 0.69
UBE3BQ7Z3V4 AC007551.1-201ENST00000457394 519 ntBASIC19.39■□□□□ 0.69
UBE3BQ7Z3V4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC19.39■□□□□ 0.69
UBE3BQ7Z3V4 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC19.39■□□□□ 0.69
UBE3BQ7Z3V4 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC19.39■□□□□ 0.69
UBE3BQ7Z3V4 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
UBE3BQ7Z3V4 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UBE3BQ7Z3V4 RPL28-206ENST00000558752 671 ntTSL 3 BASIC19.39■□□□□ 0.69
UBE3BQ7Z3V4 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC19.39■□□□□ 0.69
UBE3BQ7Z3V4 BNIP3P29-201ENST00000598302 571 ntBASIC19.39■□□□□ 0.69
UBE3BQ7Z3V4 AC011447.5-201ENST00000616168 564 ntBASIC19.39■□□□□ 0.69
UBE3BQ7Z3V4 PFAS-212ENST00000625942 396 ntTSL 5 BASIC19.39■□□□□ 0.69
UBE3BQ7Z3V4 AC092850.2-201ENST00000623821 2697 ntBASIC19.39■□□□□ 0.69
UBE3BQ7Z3V4 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
UBE3BQ7Z3V4 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC19.39■□□□□ 0.69
UBE3BQ7Z3V4 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
UBE3BQ7Z3V4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC19.39■□□□□ 0.69
UBE3BQ7Z3V4 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
UBE3BQ7Z3V4 AC008894.3-201ENST00000624324 3103 ntBASIC19.39■□□□□ 0.69
UBE3BQ7Z3V4 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC19.39■□□□□ 0.69
UBE3BQ7Z3V4 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
UBE3BQ7Z3V4 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC19.39■□□□□ 0.69
UBE3BQ7Z3V4 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC19.39■□□□□ 0.69
UBE3BQ7Z3V4 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC19.39■□□□□ 0.69
UBE3BQ7Z3V4 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC19.39■□□□□ 0.69
UBE3BQ7Z3V4 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC19.38■□□□□ 0.69
UBE3BQ7Z3V4 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
UBE3BQ7Z3V4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
UBE3BQ7Z3V4 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBE3BQ7Z3V4 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBE3BQ7Z3V4 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBE3BQ7Z3V4 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBE3BQ7Z3V4 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBE3BQ7Z3V4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBE3BQ7Z3V4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
UBE3BQ7Z3V4 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UBE3BQ7Z3V4 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC19.38■□□□□ 0.69
UBE3BQ7Z3V4 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UBE3BQ7Z3V4 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBE3BQ7Z3V4 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UBE3BQ7Z3V4 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC19.38■□□□□ 0.69
UBE3BQ7Z3V4 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UBE3BQ7Z3V4 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC19.38■□□□□ 0.69
UBE3BQ7Z3V4 MFF-223ENST00000524634 647 ntTSL 2 BASIC19.38■□□□□ 0.69
UBE3BQ7Z3V4 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC19.38■□□□□ 0.69
UBE3BQ7Z3V4 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
UBE3BQ7Z3V4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBE3BQ7Z3V4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBE3BQ7Z3V4 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC19.38■□□□□ 0.69
UBE3BQ7Z3V4 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC19.38■□□□□ 0.69
UBE3BQ7Z3V4 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC19.38■□□□□ 0.69
UBE3BQ7Z3V4 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UBE3BQ7Z3V4 HADH-212ENST00000638621 741 ntTSL 5 BASIC19.38■□□□□ 0.69
UBE3BQ7Z3V4 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
UBE3BQ7Z3V4 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC19.38■□□□□ 0.69
UBE3BQ7Z3V4 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
UBE3BQ7Z3V4 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
UBE3BQ7Z3V4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.37■□□□□ 0.69
UBE3BQ7Z3V4 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
UBE3BQ7Z3V4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBE3BQ7Z3V4 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBE3BQ7Z3V4 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBE3BQ7Z3V4 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UBE3BQ7Z3V4 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC19.37■□□□□ 0.69
UBE3BQ7Z3V4 LOX-206ENST00000639739 1626 ntTSL 5 BASIC19.37■□□□□ 0.69
UBE3BQ7Z3V4 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBE3BQ7Z3V4 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBE3BQ7Z3V4 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
UBE3BQ7Z3V4 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBE3BQ7Z3V4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC19.37■□□□□ 0.69
UBE3BQ7Z3V4 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC19.37■□□□□ 0.69
UBE3BQ7Z3V4 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
UBE3BQ7Z3V4 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
UBE3BQ7Z3V4 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC19.37■□□□□ 0.69
UBE3BQ7Z3V4 MPV17-208ENST00000405076 603 ntTSL 5 BASIC19.37■□□□□ 0.69
UBE3BQ7Z3V4 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC19.37■□□□□ 0.69
UBE3BQ7Z3V4 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
UBE3BQ7Z3V4 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms