Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC14.31□□□□□ -0.12
NIPAL3Q6P499 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 LBH-203ENST00000404397 543 ntTSL 4 BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 MTND6P24-201ENST00000440466 518 ntBASIC14.3□□□□□ -0.12
NIPAL3Q6P499 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 AL512356.2-201ENST00000546955 174 ntBASIC14.3□□□□□ -0.12
NIPAL3Q6P499 AC105021.1-202ENST00000570572 669 ntBASIC14.3□□□□□ -0.12
NIPAL3Q6P499 MIR4313-201ENST00000580760 101 ntBASIC14.3□□□□□ -0.12
NIPAL3Q6P499 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 AC093028.1-201ENST00000622998 982 ntBASIC14.3□□□□□ -0.12
NIPAL3Q6P499 Z92544.3-201ENST00000624747 417 ntBASIC14.3□□□□□ -0.12
NIPAL3Q6P499 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 AL691432.1-201ENST00000596308 1422 ntBASIC14.3□□□□□ -0.12
NIPAL3Q6P499 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 AC126365.1-201ENST00000578585 1514 ntBASIC14.3□□□□□ -0.12
NIPAL3Q6P499 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 BNIP3P1-202ENST00000550043 1585 ntBASIC14.3□□□□□ -0.12
NIPAL3Q6P499 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
NIPAL3Q6P499 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 AC127383.1-201ENST00000444697 1800 ntBASIC14.29□□□□□ -0.12
NIPAL3Q6P499 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 AC106881.1-201ENST00000605849 3329 ntBASIC14.29□□□□□ -0.12
NIPAL3Q6P499 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 CNN2P2-201ENST00000443536 909 ntBASIC14.29□□□□□ -0.12
NIPAL3Q6P499 CNN2P3-201ENST00000450201 906 ntBASIC14.29□□□□□ -0.12
NIPAL3Q6P499 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 AC007967.4-201ENST00000614700 386 ntBASIC14.29□□□□□ -0.12
NIPAL3Q6P499 AL136317.3-201ENST00000618497 906 ntBASIC14.29□□□□□ -0.12
NIPAL3Q6P499 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.29□□□□□ -0.12
NIPAL3Q6P499 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms