Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC15.1■□□□□ 0.01
PPP4R4Q6NUP7 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.1■□□□□ 0.01
PPP4R4Q6NUP7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC15.1■□□□□ 0.01
PPP4R4Q6NUP7 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.1■□□□□ 0.01
PPP4R4Q6NUP7 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.1■□□□□ 0.01
PPP4R4Q6NUP7 GPX1P2-201ENST00000429271 606 ntBASIC15.1■□□□□ 0.01
PPP4R4Q6NUP7 RHOQP3-201ENST00000437982 621 ntBASIC15.1■□□□□ 0.01
PPP4R4Q6NUP7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC15.1■□□□□ 0.01
PPP4R4Q6NUP7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PPP4R4Q6NUP7 ALG1L5P-201ENST00000482043 771 ntBASIC15.1■□□□□ 0.01
PPP4R4Q6NUP7 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.1■□□□□ 0.01
PPP4R4Q6NUP7 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.1■□□□□ 0.01
PPP4R4Q6NUP7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
PPP4R4Q6NUP7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC15.1■□□□□ 0.01
PPP4R4Q6NUP7 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.1■□□□□ 0.01
PPP4R4Q6NUP7 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.1■□□□□ 0.01
PPP4R4Q6NUP7 GPALPP1-207ENST00000611650 899 ntBASIC15.1■□□□□ 0.01
PPP4R4Q6NUP7 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
PPP4R4Q6NUP7 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PPP4R4Q6NUP7 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
PPP4R4Q6NUP7 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PPP4R4Q6NUP7 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PPP4R4Q6NUP7 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PPP4R4Q6NUP7 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PPP4R4Q6NUP7 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
PPP4R4Q6NUP7 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
PPP4R4Q6NUP7 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
PPP4R4Q6NUP7 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC15.1■□□□□ 0.01
PPP4R4Q6NUP7 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
PPP4R4Q6NUP7 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
PPP4R4Q6NUP7 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.1■□□□□ 0.01
PPP4R4Q6NUP7 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 FGD5P1-202ENST00000614866 2498 ntBASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 MYO15B-237ENST00000642007 4893 ntBASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 HAUS4P1-201ENST00000406739 1145 ntBASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 UPF3AP3-201ENST00000420996 769 ntBASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 AL031432.2-201ENST00000566714 459 ntBASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 AL928711.1-201ENST00000570165 459 ntBASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 WT1-AS_2.1-201ENST00000613208 137 ntBASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 AL691403.2-201ENST00000618460 490 ntBASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
PPP4R4Q6NUP7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
PPP4R4Q6NUP7 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.08■□□□□ 0.01
PPP4R4Q6NUP7 AC092127.1-201ENST00000567093 3455 ntBASIC15.08■□□□□ 0.01
PPP4R4Q6NUP7 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0.01
PPP4R4Q6NUP7 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PPP4R4Q6NUP7 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0.01
PPP4R4Q6NUP7 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PPP4R4Q6NUP7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PPP4R4Q6NUP7 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PPP4R4Q6NUP7 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0.01
PPP4R4Q6NUP7 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.08■□□□□ 0.01
PPP4R4Q6NUP7 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
PPP4R4Q6NUP7 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms