Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 MIR1199-201ENST00000621445 119 ntBASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 INTS4P1-203ENST00000641008 3683 ntBASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 OS9-207ENST00000439210 1946 ntTSL 2 BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 ZBTB45P2-201ENST00000452245 1531 ntBASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
ANKRD55Q3KP44 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 AC097376.2-205ENST00000610159 5334 ntBASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 MRPL20P1-201ENST00000400819 433 ntBASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 FAM8A3P-201ENST00000427218 844 ntBASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 AL031432.2-201ENST00000566714 459 ntBASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 AL928711.1-201ENST00000570165 459 ntBASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 PNMT-203ENST00000581428 677 ntTSL 2 BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 REXO1L1P-202ENST00000608646 1974 ntBASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 BNIP3P1-202ENST00000550043 1585 ntBASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.06□□□□□ -0.32
ANKRD55Q3KP44 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
ANKRD55Q3KP44 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ANKRD55Q3KP44 AC027601.5-201ENST00000624065 2482 ntBASIC13.05□□□□□ -0.32
ANKRD55Q3KP44 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ANKRD55Q3KP44 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ANKRD55Q3KP44 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
ANKRD55Q3KP44 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
ANKRD55Q3KP44 AC015656.1-201ENST00000624209 3578 ntBASIC13.05□□□□□ -0.32
ANKRD55Q3KP44 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.05□□□□□ -0.32
ANKRD55Q3KP44 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
ANKRD55Q3KP44 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
ANKRD55Q3KP44 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
ANKRD55Q3KP44 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
ANKRD55Q3KP44 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.05□□□□□ -0.32
ANKRD55Q3KP44 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ANKRD55Q3KP44 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ANKRD55Q3KP44 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
ANKRD55Q3KP44 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.05□□□□□ -0.32
ANKRD55Q3KP44 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
ANKRD55Q3KP44 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms