Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCKAP1LP55160 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NCKAP1LP55160 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC17.06■□□□□ 0.32
NCKAP1LP55160 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCKAP1LP55160 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCKAP1LP55160 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC17.06■□□□□ 0.32
NCKAP1LP55160 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NCKAP1LP55160 AC120045.2-201ENST00000567334 178 ntBASIC17.06■□□□□ 0.32
NCKAP1LP55160 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC17.06■□□□□ 0.32
NCKAP1LP55160 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCKAP1LP55160 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
NCKAP1LP55160 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC17.06■□□□□ 0.32
NCKAP1LP55160 AC107373.2-201ENST00000607735 490 ntBASIC17.06■□□□□ 0.32
NCKAP1LP55160 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC17.06■□□□□ 0.32
NCKAP1LP55160 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.06■□□□□ 0.32
NCKAP1LP55160 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.06■□□□□ 0.32
NCKAP1LP55160 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NCKAP1LP55160 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCKAP1LP55160 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCKAP1LP55160 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.06■□□□□ 0.32
NCKAP1LP55160 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.06■□□□□ 0.32
NCKAP1LP55160 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCKAP1LP55160 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
NCKAP1LP55160 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCKAP1LP55160 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
NCKAP1LP55160 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
NCKAP1LP55160 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCKAP1LP55160 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCKAP1LP55160 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
NCKAP1LP55160 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC17.06■□□□□ 0.32
NCKAP1LP55160 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.05■□□□□ 0.32
NCKAP1LP55160 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC17.05■□□□□ 0.32
NCKAP1LP55160 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC17.05■□□□□ 0.32
NCKAP1LP55160 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCKAP1LP55160 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.05■□□□□ 0.32
NCKAP1LP55160 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NCKAP1LP55160 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.05■□□□□ 0.32
NCKAP1LP55160 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCKAP1LP55160 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NCKAP1LP55160 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
NCKAP1LP55160 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCKAP1LP55160 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NCKAP1LP55160 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NCKAP1LP55160 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.05■□□□□ 0.32
NCKAP1LP55160 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NCKAP1LP55160 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCKAP1LP55160 AC134915.1-201ENST00000426461 574 ntBASIC17.05■□□□□ 0.32
NCKAP1LP55160 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NCKAP1LP55160 TAF8-206ENST00000472818 719 ntTSL 2 BASIC17.05■□□□□ 0.32
NCKAP1LP55160 AP005018.1-201ENST00000525475 301 ntBASIC17.05■□□□□ 0.32
NCKAP1LP55160 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.05■□□□□ 0.32
NCKAP1LP55160 AL359711.2-201ENST00000563105 872 ntBASIC17.05■□□□□ 0.32
NCKAP1LP55160 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
NCKAP1LP55160 WFDC1-204ENST00000613603 549 ntBASIC17.05■□□□□ 0.32
NCKAP1LP55160 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC17.05■□□□□ 0.32
NCKAP1LP55160 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCKAP1LP55160 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.05■□□□□ 0.32
NCKAP1LP55160 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.05■□□□□ 0.32
NCKAP1LP55160 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.05■□□□□ 0.32
NCKAP1LP55160 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCKAP1LP55160 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.05■□□□□ 0.32
NCKAP1LP55160 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCKAP1LP55160 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCKAP1LP55160 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.05■□□□□ 0.32
NCKAP1LP55160 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
NCKAP1LP55160 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC17.05■□□□□ 0.32
NCKAP1LP55160 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCKAP1LP55160 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCKAP1LP55160 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
NCKAP1LP55160 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
NCKAP1LP55160 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NCKAP1LP55160 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.04■□□□□ 0.32
NCKAP1LP55160 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NCKAP1LP55160 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.04■□□□□ 0.32
NCKAP1LP55160 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NCKAP1LP55160 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCKAP1LP55160 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCKAP1LP55160 AC104457.1-201ENST00000401024 814 ntBASIC17.04■□□□□ 0.32
NCKAP1LP55160 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCKAP1LP55160 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCKAP1LP55160 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCKAP1LP55160 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.04■□□□□ 0.32
NCKAP1LP55160 COX20P2-201ENST00000452636 358 ntBASIC17.04■□□□□ 0.32
NCKAP1LP55160 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.04■□□□□ 0.32
NCKAP1LP55160 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
NCKAP1LP55160 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.04■□□□□ 0.32
NCKAP1LP55160 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC17.04■□□□□ 0.32
NCKAP1LP55160 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC17.04■□□□□ 0.32
NCKAP1LP55160 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC17.04■□□□□ 0.32
NCKAP1LP55160 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.04■□□□□ 0.32
NCKAP1LP55160 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.04■□□□□ 0.32
NCKAP1LP55160 AC027307.3-201ENST00000594262 1100 ntBASIC17.04■□□□□ 0.32
NCKAP1LP55160 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
NCKAP1LP55160 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.04■□□□□ 0.32
NCKAP1LP55160 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC17.04■□□□□ 0.32
NCKAP1LP55160 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
NCKAP1LP55160 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCKAP1LP55160 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCKAP1LP55160 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
NCKAP1LP55160 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms