Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LBX1P52954 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LBX1P52954 SURF4-203ENST00000371991 715 ntTSL 3 BASIC17.23■□□□□ 0.35
LBX1P52954 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LBX1P52954 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LBX1P52954 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC17.23■□□□□ 0.35
LBX1P52954 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC17.23■□□□□ 0.35
LBX1P52954 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
LBX1P52954 FTH1P22-201ENST00000456305 520 ntBASIC17.23■□□□□ 0.35
LBX1P52954 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LBX1P52954 RPS23-204ENST00000507980 836 ntTSL 2 BASIC17.23■□□□□ 0.35
LBX1P52954 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC17.23■□□□□ 0.35
LBX1P52954 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC17.23■□□□□ 0.35
LBX1P52954 AC005962.1-201ENST00000584100 773 ntBASIC17.23■□□□□ 0.35
LBX1P52954 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC17.23■□□□□ 0.35
LBX1P52954 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC17.23■□□□□ 0.35
LBX1P52954 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
LBX1P52954 CR392039.1-201ENST00000623217 204 ntBASIC17.23■□□□□ 0.35
LBX1P52954 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LBX1P52954 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LBX1P52954 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LBX1P52954 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
LBX1P52954 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.23■□□□□ 0.35
LBX1P52954 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.23■□□□□ 0.35
LBX1P52954 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
LBX1P52954 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
LBX1P52954 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.23■□□□□ 0.35
LBX1P52954 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LBX1P52954 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
LBX1P52954 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.22■□□□□ 0.35
LBX1P52954 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.22■□□□□ 0.35
LBX1P52954 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LBX1P52954 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LBX1P52954 AMT-233ENST00000636522 1620 ntTSL 2 BASIC17.22■□□□□ 0.35
LBX1P52954 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LBX1P52954 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
LBX1P52954 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.22■□□□□ 0.35
LBX1P52954 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LBX1P52954 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC17.22■□□□□ 0.35
LBX1P52954 HLA-DMA-203ENST00000395305 777 ntBASIC17.22■□□□□ 0.35
LBX1P52954 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LBX1P52954 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC17.22■□□□□ 0.35
LBX1P52954 AC010141.1-201ENST00000411585 623 ntBASIC17.22■□□□□ 0.35
LBX1P52954 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC17.22■□□□□ 0.35
LBX1P52954 RNLS-203ENST00000437752 525 ntTSL 2 BASIC17.22■□□□□ 0.35
LBX1P52954 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LBX1P52954 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC17.22■□□□□ 0.35
LBX1P52954 DPY19L2P5-201ENST00000456300 331 ntBASIC17.22■□□□□ 0.35
LBX1P52954 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC17.22■□□□□ 0.35
LBX1P52954 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC17.22■□□□□ 0.35
LBX1P52954 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
LBX1P52954 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
LBX1P52954 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC17.22■□□□□ 0.35
LBX1P52954 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC17.22■□□□□ 0.35
LBX1P52954 AC010632.2-201ENST00000588369 1224 ntBASIC17.22■□□□□ 0.35
LBX1P52954 NAV1-210ENST00000593583 726 ntBASIC17.22■□□□□ 0.35
LBX1P52954 AC009560.1-201ENST00000620208 434 ntBASIC17.22■□□□□ 0.35
LBX1P52954 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LBX1P52954 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LBX1P52954 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
LBX1P52954 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LBX1P52954 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.22■□□□□ 0.35
LBX1P52954 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.22■□□□□ 0.35
LBX1P52954 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LBX1P52954 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC17.22■□□□□ 0.35
LBX1P52954 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
LBX1P52954 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
LBX1P52954 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
LBX1P52954 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
LBX1P52954 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LBX1P52954 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LBX1P52954 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
LBX1P52954 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LBX1P52954 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
LBX1P52954 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
LBX1P52954 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
LBX1P52954 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LBX1P52954 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LBX1P52954 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LBX1P52954 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LBX1P52954 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LBX1P52954 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LBX1P52954 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC17.21■□□□□ 0.35
LBX1P52954 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LBX1P52954 AC055811.4-201ENST00000624039 1754 ntBASIC17.21■□□□□ 0.35
LBX1P52954 FAM227B-212ENST00000561064 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
LBX1P52954 CCL25-202ENST00000315626 450 ntTSL 2 BASIC17.21■□□□□ 0.35
LBX1P52954 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LBX1P52954 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LBX1P52954 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC17.21■□□□□ 0.35
LBX1P52954 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
LBX1P52954 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LBX1P52954 NME4-203ENST00000397722 1232 ntTSL 2 BASIC17.21■□□□□ 0.35
LBX1P52954 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LBX1P52954 BANF1P3-201ENST00000412556 261 ntBASIC17.21■□□□□ 0.35
LBX1P52954 RPSAP15-201ENST00000448168 861 ntBASIC17.21■□□□□ 0.35
LBX1P52954 RBM4-207ENST00000506523 654 ntTSL 3 BASIC17.21■□□□□ 0.35
LBX1P52954 BCL2L12P1-201ENST00000508390 733 ntBASIC17.21■□□□□ 0.35
LBX1P52954 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
LBX1P52954 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms