Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
USP11P51784 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.61■□□□□ 0.41
USP11P51784 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP11P51784 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
USP11P51784 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
USP11P51784 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP11P51784 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
USP11P51784 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
USP11P51784 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP11P51784 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC17.61■□□□□ 0.41
USP11P51784 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
USP11P51784 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.61■□□□□ 0.41
USP11P51784 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP11P51784 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP11P51784 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP11P51784 MPV17-208ENST00000405076 603 ntTSL 5 BASIC17.61■□□□□ 0.41
USP11P51784 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.61■□□□□ 0.41
USP11P51784 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.61■□□□□ 0.41
USP11P51784 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC17.61■□□□□ 0.41
USP11P51784 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.61■□□□□ 0.41
USP11P51784 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC17.61■□□□□ 0.41
USP11P51784 SRP9-204ENST00000619790 377 ntTSL 2 BASIC17.61■□□□□ 0.41
USP11P51784 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
USP11P51784 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP11P51784 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP11P51784 AC136621.1-201ENST00000624017 2304 ntBASIC17.61■□□□□ 0.41
USP11P51784 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP11P51784 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
USP11P51784 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC17.61■□□□□ 0.41
USP11P51784 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP11P51784 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
USP11P51784 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
USP11P51784 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
USP11P51784 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.61■□□□□ 0.41
USP11P51784 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP11P51784 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC17.61■□□□□ 0.41
USP11P51784 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.61■□□□□ 0.41
USP11P51784 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
USP11P51784 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.6■□□□□ 0.41
USP11P51784 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.6■□□□□ 0.41
USP11P51784 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.6■□□□□ 0.41
USP11P51784 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP11P51784 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
USP11P51784 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
USP11P51784 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
USP11P51784 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
USP11P51784 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP11P51784 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP11P51784 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP11P51784 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
USP11P51784 NME2P1-201ENST00000426182 414 ntBASIC17.6■□□□□ 0.41
USP11P51784 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC17.6■□□□□ 0.41
USP11P51784 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.6■□□□□ 0.41
USP11P51784 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.6■□□□□ 0.41
USP11P51784 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP11P51784 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC17.6■□□□□ 0.41
USP11P51784 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.6■□□□□ 0.41
USP11P51784 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC17.6■□□□□ 0.41
USP11P51784 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
USP11P51784 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.6■□□□□ 0.41
USP11P51784 AL033527.5-201ENST00000641382 801 ntBASIC17.6■□□□□ 0.41
USP11P51784 CU639417.3-201ENST00000624240 1404 ntBASIC17.6■□□□□ 0.41
USP11P51784 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP11P51784 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
USP11P51784 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP11P51784 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
USP11P51784 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP11P51784 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP11P51784 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP11P51784 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC17.6■□□□□ 0.41
USP11P51784 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.6■□□□□ 0.41
USP11P51784 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
USP11P51784 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
USP11P51784 BID-213ENST00000615414 2236 ntTSL 5 BASIC17.6■□□□□ 0.41
USP11P51784 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.6■□□□□ 0.41
USP11P51784 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
USP11P51784 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.6■□□□□ 0.41
USP11P51784 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
USP11P51784 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
USP11P51784 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP11P51784 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USP11P51784 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.59■□□□□ 0.41
USP11P51784 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USP11P51784 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.59■□□□□ 0.41
USP11P51784 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USP11P51784 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
USP11P51784 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP11P51784 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP11P51784 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.59■□□□□ 0.41
USP11P51784 KRT8P22-201ENST00000562317 1415 ntBASIC17.59■□□□□ 0.41
USP11P51784 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
USP11P51784 TEX30-203ENST00000376022 828 ntTSL 2 BASIC17.59■□□□□ 0.41
USP11P51784 C1QBPP1-201ENST00000400117 770 ntBASIC17.59■□□□□ 0.41
USP11P51784 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
USP11P51784 SOCS2P1-201ENST00000417727 557 ntBASIC17.59■□□□□ 0.41
USP11P51784 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.59■□□□□ 0.41
USP11P51784 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.59■□□□□ 0.41
USP11P51784 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.59■□□□□ 0.41
USP11P51784 CR383656.12-201ENST00000549567 513 ntBASIC17.59■□□□□ 0.41
USP11P51784 AC005225.4-201ENST00000557330 545 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms