Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NR4A2P43354 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.35□□□□□ -0.11
NR4A2P43354 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.35□□□□□ -0.11
NR4A2P43354 REXO1L8P-201ENST00000604378 1897 ntBASIC14.35□□□□□ -0.11
NR4A2P43354 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.35□□□□□ -0.11
NR4A2P43354 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR4A2P43354 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC14.35□□□□□ -0.11
NR4A2P43354 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.35□□□□□ -0.11
NR4A2P43354 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NR4A2P43354 LINC01144-201ENST00000626198 1710 ntBASIC14.35□□□□□ -0.11
NR4A2P43354 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.35□□□□□ -0.11
NR4A2P43354 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.35□□□□□ -0.11
NR4A2P43354 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NR4A2P43354 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR4A2P43354 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NR4A2P43354 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A2P43354 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A2P43354 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.34□□□□□ -0.11
NR4A2P43354 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A2P43354 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A2P43354 AC006504.5-208ENST00000588784 2401 ntBASIC14.34□□□□□ -0.11
NR4A2P43354 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.34□□□□□ -0.11
NR4A2P43354 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A2P43354 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A2P43354 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.34□□□□□ -0.11
NR4A2P43354 AL031731.1-201ENST00000642131 2094 ntBASIC14.34□□□□□ -0.11
NR4A2P43354 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A2P43354 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A2P43354 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.34□□□□□ -0.11
NR4A2P43354 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A2P43354 PAWRP1-201ENST00000451083 565 ntBASIC14.34□□□□□ -0.11
NR4A2P43354 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC14.34□□□□□ -0.11
NR4A2P43354 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A2P43354 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC14.34□□□□□ -0.11
NR4A2P43354 METTL23-205ENST00000588302 925 ntTSL 5 BASIC14.34□□□□□ -0.11
NR4A2P43354 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.34□□□□□ -0.11
NR4A2P43354 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC14.34□□□□□ -0.11
NR4A2P43354 AC092902.6-201ENST00000641783 218 ntBASIC14.34□□□□□ -0.11
NR4A2P43354 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A2P43354 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.34□□□□□ -0.11
NR4A2P43354 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.34□□□□□ -0.11
NR4A2P43354 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NR4A2P43354 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A2P43354 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A2P43354 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NR4A2P43354 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A2P43354 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A2P43354 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NR4A2P43354 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NR4A2P43354 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NR4A2P43354 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
NR4A2P43354 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
NR4A2P43354 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
NR4A2P43354 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NR4A2P43354 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC14.33□□□□□ -0.12
NR4A2P43354 AL512652.2-201ENST00000625156 1716 ntBASIC14.33□□□□□ -0.12
NR4A2P43354 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A2P43354 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A2P43354 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.33□□□□□ -0.12
NR4A2P43354 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A2P43354 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
NR4A2P43354 AL390755.1-201ENST00000623716 2027 ntBASIC14.33□□□□□ -0.12
NR4A2P43354 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC14.33□□□□□ -0.12
NR4A2P43354 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NR4A2P43354 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A2P43354 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A2P43354 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.33□□□□□ -0.12
NR4A2P43354 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
NR4A2P43354 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.33□□□□□ -0.12
NR4A2P43354 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.12
NR4A2P43354 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
NR4A2P43354 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.33□□□□□ -0.12
NR4A2P43354 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.33□□□□□ -0.12
NR4A2P43354 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.33□□□□□ -0.12
NR4A2P43354 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A2P43354 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.33□□□□□ -0.12
NR4A2P43354 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A2P43354 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.33□□□□□ -0.12
NR4A2P43354 AC004835.2-201ENST00000603762 682 ntBASIC14.33□□□□□ -0.12
NR4A2P43354 AC027612.4-201ENST00000605371 583 ntBASIC14.33□□□□□ -0.12
NR4A2P43354 REXO1L3P-201ENST00000622202 1288 ntBASIC14.33□□□□□ -0.12
NR4A2P43354 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.33□□□□□ -0.12
NR4A2P43354 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A2P43354 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A2P43354 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A2P43354 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.33□□□□□ -0.12
NR4A2P43354 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A2P43354 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC14.33□□□□□ -0.12
NR4A2P43354 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC14.33□□□□□ -0.12
NR4A2P43354 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC14.33□□□□□ -0.12
NR4A2P43354 AC129492.6-201ENST00000611383 1305 ntBASIC14.33□□□□□ -0.12
NR4A2P43354 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A2P43354 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A2P43354 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A2P43354 AC020658.6-201ENST00000623564 1870 ntBASIC14.33□□□□□ -0.12
NR4A2P43354 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A2P43354 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
NR4A2P43354 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
NR4A2P43354 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.33□□□□□ -0.12
NR4A2P43354 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms