Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MTHFRP42898 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
MTHFRP42898 HLA-A-202ENST00000376806 1854 ntBASIC16.35■□□□□ 0.21
MTHFRP42898 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.35■□□□□ 0.21
MTHFRP42898 RNF216P1-203ENST00000404404 2427 ntBASIC16.35■□□□□ 0.21
MTHFRP42898 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MTHFRP42898 AC138028.6-201ENST00000616106 1482 ntBASIC16.35■□□□□ 0.21
MTHFRP42898 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.35■□□□□ 0.21
MTHFRP42898 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MTHFRP42898 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MTHFRP42898 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.34■□□□□ 0.21
MTHFRP42898 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MTHFRP42898 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.34■□□□□ 0.21
MTHFRP42898 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MTHFRP42898 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
MTHFRP42898 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MTHFRP42898 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MTHFRP42898 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MTHFRP42898 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MTHFRP42898 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MTHFRP42898 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MTHFRP42898 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.34■□□□□ 0.21
MTHFRP42898 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MTHFRP42898 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
MTHFRP42898 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MTHFRP42898 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
MTHFRP42898 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MTHFRP42898 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MTHFRP42898 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC16.34■□□□□ 0.21
MTHFRP42898 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.34■□□□□ 0.21
MTHFRP42898 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.34■□□□□ 0.21
MTHFRP42898 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
MTHFRP42898 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
MTHFRP42898 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC16.34■□□□□ 0.21
MTHFRP42898 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MTHFRP42898 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC16.34■□□□□ 0.21
MTHFRP42898 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC16.34■□□□□ 0.21
MTHFRP42898 AL021578.1-201ENST00000613646 709 ntBASIC16.34■□□□□ 0.21
MTHFRP42898 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.34■□□□□ 0.21
MTHFRP42898 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.34■□□□□ 0.21
MTHFRP42898 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.34■□□□□ 0.21
MTHFRP42898 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
MTHFRP42898 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.34■□□□□ 0.21
MTHFRP42898 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
MTHFRP42898 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MTHFRP42898 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.34■□□□□ 0.21
MTHFRP42898 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MTHFRP42898 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MTHFRP42898 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MTHFRP42898 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
MTHFRP42898 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
MTHFRP42898 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
MTHFRP42898 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
MTHFRP42898 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
MTHFRP42898 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
MTHFRP42898 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
MTHFRP42898 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.33■□□□□ 0.2
MTHFRP42898 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.33■□□□□ 0.2
MTHFRP42898 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
MTHFRP42898 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MTHFRP42898 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MTHFRP42898 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MTHFRP42898 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
MTHFRP42898 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC16.33■□□□□ 0.2
MTHFRP42898 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
MTHFRP42898 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
MTHFRP42898 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
MTHFRP42898 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.33■□□□□ 0.2
MTHFRP42898 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.33■□□□□ 0.2
MTHFRP42898 MTX1P1-201ENST00000440904 838 ntBASIC16.33■□□□□ 0.2
MTHFRP42898 AC091804.1-201ENST00000486888 567 ntBASIC16.33■□□□□ 0.2
MTHFRP42898 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.33■□□□□ 0.2
MTHFRP42898 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.33■□□□□ 0.2
MTHFRP42898 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.33■□□□□ 0.2
MTHFRP42898 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.33■□□□□ 0.2
MTHFRP42898 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.33■□□□□ 0.2
MTHFRP42898 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC16.33■□□□□ 0.2
MTHFRP42898 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MTHFRP42898 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC16.33■□□□□ 0.2
MTHFRP42898 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
MTHFRP42898 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
MTHFRP42898 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MTHFRP42898 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MTHFRP42898 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MTHFRP42898 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
MTHFRP42898 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MTHFRP42898 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MTHFRP42898 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.33■□□□□ 0.2
MTHFRP42898 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.33■□□□□ 0.2
MTHFRP42898 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
MTHFRP42898 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MTHFRP42898 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MTHFRP42898 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MTHFRP42898 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MTHFRP42898 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
MTHFRP42898 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
MTHFRP42898 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.33■□□□□ 0.2
MTHFRP42898 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MTHFRP42898 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.33■□□□□ 0.2
MTHFRP42898 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms