Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.21■□□□□ 0.19
SCNN1AP37088 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
SCNN1AP37088 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.21■□□□□ 0.19
SCNN1AP37088 AC104596.2-201ENST00000512793 793 ntBASIC16.21■□□□□ 0.19
SCNN1AP37088 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.21■□□□□ 0.19
SCNN1AP37088 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.21■□□□□ 0.19
SCNN1AP37088 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.21■□□□□ 0.19
SCNN1AP37088 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.21■□□□□ 0.19
SCNN1AP37088 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC16.21■□□□□ 0.19
SCNN1AP37088 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.21■□□□□ 0.19
SCNN1AP37088 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCNN1AP37088 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SCNN1AP37088 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
SCNN1AP37088 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCNN1AP37088 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.21■□□□□ 0.19
SCNN1AP37088 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SCNN1AP37088 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.21■□□□□ 0.19
SCNN1AP37088 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.21■□□□□ 0.19
SCNN1AP37088 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCNN1AP37088 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCNN1AP37088 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC16.21■□□□□ 0.19
SCNN1AP37088 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SCNN1AP37088 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
SCNN1AP37088 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.21■□□□□ 0.18
SCNN1AP37088 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SCNN1AP37088 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
SCNN1AP37088 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SCNN1AP37088 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SCNN1AP37088 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.21■□□□□ 0.18
SCNN1AP37088 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.21■□□□□ 0.18
SCNN1AP37088 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SCNN1AP37088 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SCNN1AP37088 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCNN1AP37088 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCNN1AP37088 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SCNN1AP37088 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.2■□□□□ 0.18
SCNN1AP37088 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.2■□□□□ 0.18
SCNN1AP37088 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCNN1AP37088 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SCNN1AP37088 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCNN1AP37088 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
SCNN1AP37088 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCNN1AP37088 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCNN1AP37088 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SCNN1AP37088 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
SCNN1AP37088 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCNN1AP37088 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SCNN1AP37088 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.2■□□□□ 0.18
SCNN1AP37088 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SCNN1AP37088 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCNN1AP37088 PIN1P1-201ENST00000412108 996 ntBASIC16.2■□□□□ 0.18
SCNN1AP37088 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.2■□□□□ 0.18
SCNN1AP37088 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.2■□□□□ 0.18
SCNN1AP37088 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.2■□□□□ 0.18
SCNN1AP37088 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.2■□□□□ 0.18
SCNN1AP37088 TMEM261P1-201ENST00000604899 340 ntBASIC16.2■□□□□ 0.18
SCNN1AP37088 AC093813.1-201ENST00000605066 256 ntBASIC16.2■□□□□ 0.18
SCNN1AP37088 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
SCNN1AP37088 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SCNN1AP37088 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
SCNN1AP37088 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCNN1AP37088 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCNN1AP37088 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
SCNN1AP37088 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SCNN1AP37088 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCNN1AP37088 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCNN1AP37088 AC006058.4-201ENST00000624016 1670 ntBASIC16.2■□□□□ 0.18
SCNN1AP37088 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCNN1AP37088 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCNN1AP37088 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SCNN1AP37088 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCNN1AP37088 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCNN1AP37088 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCNN1AP37088 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SCNN1AP37088 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCNN1AP37088 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SCNN1AP37088 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.19■□□□□ 0.18
SCNN1AP37088 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCNN1AP37088 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCNN1AP37088 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.19■□□□□ 0.18
SCNN1AP37088 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.19■□□□□ 0.18
SCNN1AP37088 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SCNN1AP37088 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.19■□□□□ 0.18
SCNN1AP37088 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.19■□□□□ 0.18
SCNN1AP37088 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SCNN1AP37088 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.19■□□□□ 0.18
SCNN1AP37088 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SCNN1AP37088 AC007541.1-201ENST00000570282 1469 ntBASIC16.19■□□□□ 0.18
SCNN1AP37088 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCNN1AP37088 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCNN1AP37088 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.19■□□□□ 0.18
SCNN1AP37088 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCNN1AP37088 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.19■□□□□ 0.18
SCNN1AP37088 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SCNN1AP37088 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.19■□□□□ 0.18
SCNN1AP37088 AC004066.1-201ENST00000502488 802 ntBASIC16.19■□□□□ 0.18
SCNN1AP37088 TERF1P3-201ENST00000505638 1227 ntBASIC16.19■□□□□ 0.18
SCNN1AP37088 API5-211ENST00000534695 560 ntTSL 5 BASIC16.19■□□□□ 0.18
SCNN1AP37088 AC092552.1-201ENST00000547243 906 ntBASIC16.19■□□□□ 0.18
SCNN1AP37088 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms