Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDE6BP35913 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
PDE6BP35913 AC104457.1-201ENST00000401024 814 ntBASIC19.07■□□□□ 0.64
PDE6BP35913 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDE6BP35913 POM121L8P-201ENST00000417732 1281 ntBASIC19.07■□□□□ 0.64
PDE6BP35913 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC19.07■□□□□ 0.64
PDE6BP35913 POM121L9P-203ENST00000441984 1285 ntBASIC19.07■□□□□ 0.64
PDE6BP35913 FTLP10-202ENST00000505798 471 ntBASIC19.07■□□□□ 0.64
PDE6BP35913 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC19.07■□□□□ 0.64
PDE6BP35913 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC19.07■□□□□ 0.64
PDE6BP35913 MIR5572-201ENST00000583188 137 ntBASIC19.07■□□□□ 0.64
PDE6BP35913 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
PDE6BP35913 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDE6BP35913 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDE6BP35913 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PDE6BP35913 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
PDE6BP35913 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC19.07■□□□□ 0.64
PDE6BP35913 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC19.07■□□□□ 0.64
PDE6BP35913 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDE6BP35913 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDE6BP35913 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDE6BP35913 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC19.07■□□□□ 0.64
PDE6BP35913 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC19.07■□□□□ 0.64
PDE6BP35913 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC19.07■□□□□ 0.64
PDE6BP35913 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PDE6BP35913 AL158070.2-201ENST00000623713 1621 ntBASIC19.07■□□□□ 0.64
PDE6BP35913 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC19.07■□□□□ 0.64
PDE6BP35913 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PDE6BP35913 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDE6BP35913 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.06■□□□□ 0.64
PDE6BP35913 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDE6BP35913 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDE6BP35913 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDE6BP35913 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDE6BP35913 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDE6BP35913 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PDE6BP35913 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
PDE6BP35913 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PDE6BP35913 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC19.06■□□□□ 0.64
PDE6BP35913 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDE6BP35913 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC19.06■□□□□ 0.64
PDE6BP35913 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC19.06■□□□□ 0.64
PDE6BP35913 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
PDE6BP35913 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDE6BP35913 MPV17-204ENST00000399052 749 ntTSL 4 BASIC19.06■□□□□ 0.64
PDE6BP35913 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
PDE6BP35913 MSRA-203ENST00000441698 788 ntTSL 2 BASIC19.06■□□□□ 0.64
PDE6BP35913 CHMP1AP1-201ENST00000445563 662 ntBASIC19.06■□□□□ 0.64
PDE6BP35913 HIST2H2BB-201ENST00000449108 381 ntBASIC19.06■□□□□ 0.64
PDE6BP35913 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC19.06■□□□□ 0.64
PDE6BP35913 OARD1-204ENST00000464633 717 ntTSL 2 BASIC19.06■□□□□ 0.64
PDE6BP35913 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC19.06■□□□□ 0.64
PDE6BP35913 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC19.06■□□□□ 0.64
PDE6BP35913 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC19.06■□□□□ 0.64
PDE6BP35913 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC19.06■□□□□ 0.64
PDE6BP35913 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC19.06■□□□□ 0.64
PDE6BP35913 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC19.06■□□□□ 0.64
PDE6BP35913 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC19.06■□□□□ 0.64
PDE6BP35913 AL645939.5-201ENST00000606834 243 ntBASIC19.06■□□□□ 0.64
PDE6BP35913 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PDE6BP35913 AC079336.7-201ENST00000623428 1078 ntBASIC19.06■□□□□ 0.64
PDE6BP35913 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.06■□□□□ 0.64
PDE6BP35913 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDE6BP35913 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDE6BP35913 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDE6BP35913 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDE6BP35913 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.06■□□□□ 0.64
PDE6BP35913 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PDE6BP35913 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
PDE6BP35913 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDE6BP35913 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.05■□□□□ 0.64
PDE6BP35913 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDE6BP35913 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDE6BP35913 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDE6BP35913 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDE6BP35913 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDE6BP35913 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDE6BP35913 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PDE6BP35913 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
PDE6BP35913 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PDE6BP35913 EIF3FP3-201ENST00000434851 1086 ntBASIC19.05■□□□□ 0.64
PDE6BP35913 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC19.05■□□□□ 0.64
PDE6BP35913 AC011742.3-201ENST00000439053 820 ntBASIC19.05■□□□□ 0.64
PDE6BP35913 AC021723.1-201ENST00000486306 515 ntBASIC19.05■□□□□ 0.64
PDE6BP35913 AC100850.1-201ENST00000506768 649 ntBASIC19.05■□□□□ 0.64
PDE6BP35913 AL391280.1-201ENST00000506969 1062 ntBASIC19.05■□□□□ 0.64
PDE6BP35913 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC19.05■□□□□ 0.64
PDE6BP35913 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC19.05■□□□□ 0.64
PDE6BP35913 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC19.05■□□□□ 0.64
PDE6BP35913 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC19.05■□□□□ 0.64
PDE6BP35913 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC19.05■□□□□ 0.64
PDE6BP35913 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC19.05■□□□□ 0.64
PDE6BP35913 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC19.05■□□□□ 0.64
PDE6BP35913 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PDE6BP35913 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDE6BP35913 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDE6BP35913 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDE6BP35913 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC19.05■□□□□ 0.64
PDE6BP35913 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PDE6BP35913 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms