Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COPB2P35606 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.84■□□□□ 0.45
COPB2P35606 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
COPB2P35606 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPB2P35606 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPB2P35606 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
COPB2P35606 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.84■□□□□ 0.45
COPB2P35606 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPB2P35606 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
COPB2P35606 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
COPB2P35606 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
COPB2P35606 MTHFR-217ENST00000641820 1569 ntBASIC17.83■□□□□ 0.45
COPB2P35606 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.83■□□□□ 0.45
COPB2P35606 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
COPB2P35606 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.83■□□□□ 0.45
COPB2P35606 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC17.83■□□□□ 0.45
COPB2P35606 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
COPB2P35606 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
COPB2P35606 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COPB2P35606 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC17.83■□□□□ 0.44
COPB2P35606 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.83■□□□□ 0.44
COPB2P35606 MIR4313-201ENST00000580760 101 ntBASIC17.83■□□□□ 0.44
COPB2P35606 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.83■□□□□ 0.44
COPB2P35606 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
COPB2P35606 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.83■□□□□ 0.44
COPB2P35606 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.83■□□□□ 0.44
COPB2P35606 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.83■□□□□ 0.44
COPB2P35606 BX539320.1-201ENST00000623759 877 ntBASIC17.83■□□□□ 0.44
COPB2P35606 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
COPB2P35606 AC018892.3-201ENST00000623986 2499 ntBASIC17.83■□□□□ 0.44
COPB2P35606 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COPB2P35606 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC17.83■□□□□ 0.44
COPB2P35606 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
COPB2P35606 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.83■□□□□ 0.44
COPB2P35606 AL138799.1-201ENST00000448213 1675 ntBASIC17.83■□□□□ 0.44
COPB2P35606 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.83■□□□□ 0.44
COPB2P35606 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
COPB2P35606 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC17.83■□□□□ 0.44
COPB2P35606 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
COPB2P35606 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
COPB2P35606 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
COPB2P35606 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COPB2P35606 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COPB2P35606 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.82■□□□□ 0.44
COPB2P35606 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COPB2P35606 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COPB2P35606 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COPB2P35606 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COPB2P35606 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.82■□□□□ 0.44
COPB2P35606 AC020907.1-201ENST00000616460 1350 ntBASIC17.82■□□□□ 0.44
COPB2P35606 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COPB2P35606 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
COPB2P35606 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COPB2P35606 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COPB2P35606 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.82■□□□□ 0.44
COPB2P35606 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COPB2P35606 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COPB2P35606 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COPB2P35606 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COPB2P35606 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC17.82■□□□□ 0.44
COPB2P35606 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COPB2P35606 AC026954.1-201ENST00000429771 1293 ntBASIC17.82■□□□□ 0.44
COPB2P35606 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COPB2P35606 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
COPB2P35606 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.82■□□□□ 0.44
COPB2P35606 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COPB2P35606 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.82■□□□□ 0.44
COPB2P35606 MIR6787-201ENST00000616675 61 ntBASIC17.82■□□□□ 0.44
COPB2P35606 AC132938.4-201ENST00000623835 848 ntBASIC17.82■□□□□ 0.44
COPB2P35606 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
COPB2P35606 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COPB2P35606 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
COPB2P35606 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COPB2P35606 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC17.82■□□□□ 0.44
COPB2P35606 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COPB2P35606 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
COPB2P35606 BANP-204ENST00000393208 2283 ntTSL 2 BASIC17.82■□□□□ 0.44
COPB2P35606 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COPB2P35606 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC17.82■□□□□ 0.44
COPB2P35606 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.82■□□□□ 0.44
COPB2P35606 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COPB2P35606 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.82■□□□□ 0.44
COPB2P35606 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COPB2P35606 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
COPB2P35606 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.81■□□□□ 0.44
COPB2P35606 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COPB2P35606 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.81■□□□□ 0.44
COPB2P35606 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.81■□□□□ 0.44
COPB2P35606 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COPB2P35606 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
COPB2P35606 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COPB2P35606 KRT8P44-201ENST00000441609 1350 ntBASIC17.81■□□□□ 0.44
COPB2P35606 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COPB2P35606 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COPB2P35606 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
COPB2P35606 PAUPAR-201ENST00000630360 2965 ntBASIC17.81■□□□□ 0.44
COPB2P35606 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
COPB2P35606 TPO-206ENST00000382269 1155 ntTSL 5 BASIC17.81■□□□□ 0.44
COPB2P35606 NUS1P3-201ENST00000423502 862 ntBASIC17.81■□□□□ 0.44
COPB2P35606 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms