Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CKS2P33552 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
CKS2P33552 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CKS2P33552 PPIH-202ENST00000372549 327 ntTSL 3 BASIC11.59□□□□□ -0.55
CKS2P33552 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC11.59□□□□□ -0.55
CKS2P33552 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CKS2P33552 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CKS2P33552 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
CKS2P33552 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CKS2P33552 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC11.59□□□□□ -0.55
CKS2P33552 IGHV3-47-201ENST00000425060 335 ntBASIC11.59□□□□□ -0.55
CKS2P33552 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC11.59□□□□□ -0.55
CKS2P33552 DRAXINP1-201ENST00000437611 948 ntBASIC11.59□□□□□ -0.55
CKS2P33552 KRT18P57-201ENST00000443599 1254 ntBASIC11.59□□□□□ -0.55
CKS2P33552 MTRF1LP2-201ENST00000506027 1122 ntBASIC11.59□□□□□ -0.55
CKS2P33552 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CKS2P33552 CIB2-208ENST00000560618 804 ntTSL 2 BASIC11.59□□□□□ -0.55
CKS2P33552 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CKS2P33552 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC11.59□□□□□ -0.55
CKS2P33552 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC11.59□□□□□ -0.55
CKS2P33552 STRN-202ENST00000379213 2254 ntTSL 5 BASIC11.59□□□□□ -0.55
CKS2P33552 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
CKS2P33552 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CKS2P33552 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CKS2P33552 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CKS2P33552 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CKS2P33552 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CKS2P33552 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CKS2P33552 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CKS2P33552 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
CKS2P33552 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CKS2P33552 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
CKS2P33552 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CKS2P33552 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
CKS2P33552 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
CKS2P33552 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CKS2P33552 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CKS2P33552 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC11.59□□□□□ -0.55
CKS2P33552 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC11.59□□□□□ -0.55
CKS2P33552 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC11.59□□□□□ -0.55
CKS2P33552 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC11.59□□□□□ -0.55
CKS2P33552 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
CKS2P33552 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC11.59□□□□□ -0.55
CKS2P33552 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.55
CKS2P33552 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
CKS2P33552 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
CKS2P33552 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC11.58□□□□□ -0.55
CKS2P33552 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC11.58□□□□□ -0.55
CKS2P33552 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CKS2P33552 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CKS2P33552 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC11.58□□□□□ -0.56
CKS2P33552 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
CKS2P33552 AC127383.1-201ENST00000444697 1800 ntBASIC11.58□□□□□ -0.56
CKS2P33552 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CKS2P33552 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CKS2P33552 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
CKS2P33552 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CKS2P33552 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC11.58□□□□□ -0.56
CKS2P33552 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
CKS2P33552 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CKS2P33552 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CKS2P33552 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC11.58□□□□□ -0.56
CKS2P33552 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
CKS2P33552 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
CKS2P33552 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CKS2P33552 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC11.58□□□□□ -0.56
CKS2P33552 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CKS2P33552 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CKS2P33552 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
CKS2P33552 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
CKS2P33552 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CKS2P33552 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC11.58□□□□□ -0.56
CKS2P33552 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CKS2P33552 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CKS2P33552 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC11.58□□□□□ -0.56
CKS2P33552 LINC00265-3P-201ENST00000447588 903 ntBASIC11.58□□□□□ -0.56
CKS2P33552 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC11.58□□□□□ -0.56
CKS2P33552 AC063952.2-201ENST00000498792 1227 ntBASIC11.58□□□□□ -0.56
CKS2P33552 AC104819.1-201ENST00000504587 486 ntBASIC11.58□□□□□ -0.56
CKS2P33552 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CKS2P33552 NKAPP1-205ENST00000585790 367 ntBASIC11.58□□□□□ -0.56
CKS2P33552 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CKS2P33552 AC091076.1-201ENST00000610741 619 ntBASIC11.58□□□□□ -0.56
CKS2P33552 AL139288.1-201ENST00000623748 933 ntBASIC11.58□□□□□ -0.56
CKS2P33552 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC11.58□□□□□ -0.56
CKS2P33552 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
CKS2P33552 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CKS2P33552 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC11.58□□□□□ -0.56
CKS2P33552 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CKS2P33552 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC11.58□□□□□ -0.56
CKS2P33552 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CKS2P33552 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
CKS2P33552 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CKS2P33552 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC11.58□□□□□ -0.56
CKS2P33552 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CKS2P33552 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CKS2P33552 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CKS2P33552 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC11.58□□□□□ -0.56
CKS2P33552 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CKS2P33552 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC11.58□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms