Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CPS1P31327 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
CPS1P31327 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
CPS1P31327 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CPS1P31327 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CPS1P31327 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CPS1P31327 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC21.57■■□□□ 1.04
CPS1P31327 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPS1P31327 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC21.57■■□□□ 1.04
CPS1P31327 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPS1P31327 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPS1P31327 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CPS1P31327 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPS1P31327 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CPS1P31327 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPS1P31327 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPS1P31327 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CPS1P31327 AC130709.1-201ENST00000484779 1212 ntBASIC21.57■■□□□ 1.04
CPS1P31327 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CPS1P31327 AC012158.2-201ENST00000536546 354 ntBASIC21.57■■□□□ 1.04
CPS1P31327 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CPS1P31327 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC21.57■■□□□ 1.04
CPS1P31327 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC21.57■■□□□ 1.04
CPS1P31327 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CPS1P31327 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPS1P31327 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC21.57■■□□□ 1.04
CPS1P31327 EIF5AP2-201ENST00000585668 1047 ntBASIC21.57■■□□□ 1.04
CPS1P31327 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC21.57■■□□□ 1.04
CPS1P31327 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPS1P31327 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC21.57■■□□□ 1.04
CPS1P31327 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPS1P31327 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPS1P31327 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
CPS1P31327 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
CPS1P31327 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CPS1P31327 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPS1P31327 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CPS1P31327 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPS1P31327 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CPS1P31327 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CPS1P31327 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC21.56■■□□□ 1.04
CPS1P31327 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CPS1P31327 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPS1P31327 AMT-224ENST00000635808 1610 ntTSL 5 BASIC21.56■■□□□ 1.04
CPS1P31327 AP000356.3-201ENST00000382243 753 ntBASIC21.56■■□□□ 1.04
CPS1P31327 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CPS1P31327 PSMD4P1-201ENST00000433951 1109 ntBASIC21.56■■□□□ 1.04
CPS1P31327 RPL18AP3-201ENST00000462885 528 ntBASIC21.56■■□□□ 1.04
CPS1P31327 SAMD11P1-201ENST00000571429 661 ntBASIC21.56■■□□□ 1.04
CPS1P31327 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC21.56■■□□□ 1.04
CPS1P31327 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC21.56■■□□□ 1.04
CPS1P31327 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC21.56■■□□□ 1.04
CPS1P31327 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CPS1P31327 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC21.56■■□□□ 1.04
CPS1P31327 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CPS1P31327 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC21.56■■□□□ 1.04
CPS1P31327 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CPS1P31327 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPS1P31327 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CPS1P31327 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CPS1P31327 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC21.56■■□□□ 1.04
CPS1P31327 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CPS1P31327 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC21.56■■□□□ 1.04
CPS1P31327 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPS1P31327 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPS1P31327 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
CPS1P31327 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CPS1P31327 AL158070.2-201ENST00000623713 1621 ntBASIC21.56■■□□□ 1.04
CPS1P31327 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CPS1P31327 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CPS1P31327 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC21.56■■□□□ 1.04
CPS1P31327 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
CPS1P31327 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC21.55■■□□□ 1.04
CPS1P31327 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
CPS1P31327 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.55■■□□□ 1.04
CPS1P31327 AL645937.2-201ENST00000396808 931 ntBASIC21.55■■□□□ 1.04
CPS1P31327 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPS1P31327 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC21.55■■□□□ 1.04
CPS1P31327 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC21.55■■□□□ 1.04
CPS1P31327 AC018463.1-201ENST00000456674 917 ntBASIC21.55■■□□□ 1.04
CPS1P31327 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC21.55■■□□□ 1.04
CPS1P31327 DNAJB13-203ENST00000537753 912 ntTSL 3 BASIC21.55■■□□□ 1.04
CPS1P31327 AC009955.4-201ENST00000597192 544 ntBASIC21.55■■□□□ 1.04
CPS1P31327 PLS3-210ENST00000626746 216 ntTSL 4 BASIC21.55■■□□□ 1.04
CPS1P31327 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CPS1P31327 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPS1P31327 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPS1P31327 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC21.55■■□□□ 1.04
CPS1P31327 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPS1P31327 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPS1P31327 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC21.55■■□□□ 1.04
CPS1P31327 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CPS1P31327 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
CPS1P31327 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CPS1P31327 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CPS1P31327 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC21.55■■□□□ 1.04
CPS1P31327 LSM5-207ENST00000410044 687 ntTSL 3 BASIC21.55■■□□□ 1.04
CPS1P31327 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CPS1P31327 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC21.55■■□□□ 1.04
CPS1P31327 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms