Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXC8P31273 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.8■□□□□ 0.28
HOXC8P31273 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC8P31273 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC8P31273 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.8■□□□□ 0.28
HOXC8P31273 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXC8P31273 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC8P31273 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC8P31273 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HOXC8P31273 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.8■□□□□ 0.28
HOXC8P31273 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC8P31273 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC8P31273 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.8■□□□□ 0.28
HOXC8P31273 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HOXC8P31273 AC055811.4-201ENST00000624039 1754 ntBASIC16.79■□□□□ 0.28
HOXC8P31273 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC8P31273 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.79■□□□□ 0.28
HOXC8P31273 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC8P31273 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC8P31273 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.79■□□□□ 0.28
HOXC8P31273 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC8P31273 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.79■□□□□ 0.28
HOXC8P31273 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.79■□□□□ 0.28
HOXC8P31273 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC8P31273 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC8P31273 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC8P31273 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
HOXC8P31273 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC8P31273 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.79■□□□□ 0.28
HOXC8P31273 AL354877.1-201ENST00000424412 413 ntBASIC16.79■□□□□ 0.28
HOXC8P31273 FNTAP2-201ENST00000430308 634 ntBASIC16.79■□□□□ 0.28
HOXC8P31273 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC16.79■□□□□ 0.28
HOXC8P31273 ATP6V0CP2-201ENST00000469409 207 ntBASIC16.79■□□□□ 0.28
HOXC8P31273 RNA5SP423-201ENST00000517127 109 ntBASIC16.79■□□□□ 0.28
HOXC8P31273 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.79■□□□□ 0.28
HOXC8P31273 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC16.79■□□□□ 0.28
HOXC8P31273 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.79■□□□□ 0.28
HOXC8P31273 AL451050.2-201ENST00000606967 682 ntBASIC16.79■□□□□ 0.28
HOXC8P31273 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC8P31273 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC16.79■□□□□ 0.28
HOXC8P31273 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC8P31273 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC8P31273 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.79■□□□□ 0.28
HOXC8P31273 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC8P31273 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.79■□□□□ 0.28
HOXC8P31273 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.79■□□□□ 0.28
HOXC8P31273 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HOXC8P31273 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.79■□□□□ 0.28
HOXC8P31273 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC8P31273 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HOXC8P31273 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HOXC8P31273 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC16.78■□□□□ 0.28
HOXC8P31273 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC8P31273 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC8P31273 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC8P31273 AL360270.3-201ENST00000609118 1348 ntBASIC16.78■□□□□ 0.28
HOXC8P31273 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
HOXC8P31273 AC105250.1-201ENST00000509378 2057 ntBASIC16.78■□□□□ 0.28
HOXC8P31273 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC8P31273 SLC25A24P2-201ENST00000415059 510 ntBASIC16.78■□□□□ 0.28
HOXC8P31273 AC004945.1-201ENST00000416738 983 ntBASIC16.78■□□□□ 0.28
HOXC8P31273 HNRNPA1P63-201ENST00000427917 963 ntBASIC16.78■□□□□ 0.28
HOXC8P31273 GHSR-202ENST00000427970 912 ntBASIC16.78■□□□□ 0.28
HOXC8P31273 AC016700.1-201ENST00000429424 312 ntBASIC16.78■□□□□ 0.28
HOXC8P31273 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC16.78■□□□□ 0.28
HOXC8P31273 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC8P31273 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.78■□□□□ 0.28
HOXC8P31273 FTLP10-202ENST00000505798 471 ntBASIC16.78■□□□□ 0.28
HOXC8P31273 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC16.78■□□□□ 0.28
HOXC8P31273 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.78■□□□□ 0.28
HOXC8P31273 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.78■□□□□ 0.28
HOXC8P31273 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC8P31273 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC16.78■□□□□ 0.28
HOXC8P31273 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.78■□□□□ 0.28
HOXC8P31273 MIR3619-201ENST00000579667 83 ntBASIC16.78■□□□□ 0.28
HOXC8P31273 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.78■□□□□ 0.28
HOXC8P31273 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.78■□□□□ 0.28
HOXC8P31273 DIO1-215ENST00000610607 796 ntTSL 5 BASIC16.78■□□□□ 0.28
HOXC8P31273 AP001002.3-201ENST00000623482 206 ntBASIC16.78■□□□□ 0.28
HOXC8P31273 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.78■□□□□ 0.28
HOXC8P31273 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC8P31273 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC8P31273 AC099398.1-201ENST00000567919 2776 ntBASIC16.78■□□□□ 0.28
HOXC8P31273 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC8P31273 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC8P31273 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC16.78■□□□□ 0.28
HOXC8P31273 ZBTB45P1-201ENST00000452761 1456 ntBASIC16.78■□□□□ 0.28
HOXC8P31273 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC8P31273 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
HOXC8P31273 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC8P31273 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC8P31273 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC8P31273 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC8P31273 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC8P31273 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC8P31273 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC8P31273 AP000593.2-201ENST00000542775 1433 ntBASIC16.78■□□□□ 0.28
HOXC8P31273 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC8P31273 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HOXC8P31273 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms