Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 AC006486.2-201ENST00000624246 2199 ntBASIC17.06■□□□□ 0.32
RFX1P22670 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RFX1P22670 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFX1P22670 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.06■□□□□ 0.32
RFX1P22670 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.06■□□□□ 0.32
RFX1P22670 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC17.06■□□□□ 0.32
RFX1P22670 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFX1P22670 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RFX1P22670 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RFX1P22670 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC17.06■□□□□ 0.32
RFX1P22670 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.06■□□□□ 0.32
RFX1P22670 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.06■□□□□ 0.32
RFX1P22670 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFX1P22670 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFX1P22670 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RFX1P22670 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFX1P22670 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFX1P22670 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC17.05■□□□□ 0.32
RFX1P22670 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFX1P22670 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
RFX1P22670 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFX1P22670 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.05■□□□□ 0.32
RFX1P22670 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFX1P22670 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.05■□□□□ 0.32
RFX1P22670 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFX1P22670 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
RFX1P22670 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFX1P22670 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFX1P22670 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.05■□□□□ 0.32
RFX1P22670 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
RFX1P22670 AL512384.1-201ENST00000406683 331 ntBASIC17.05■□□□□ 0.32
RFX1P22670 RPS2P32-201ENST00000439199 892 ntBASIC17.05■□□□□ 0.32
RFX1P22670 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RFX1P22670 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.05■□□□□ 0.32
RFX1P22670 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.05■□□□□ 0.32
RFX1P22670 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.05■□□□□ 0.32
RFX1P22670 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC17.05■□□□□ 0.32
RFX1P22670 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC17.05■□□□□ 0.32
RFX1P22670 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFX1P22670 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC17.05■□□□□ 0.32
RFX1P22670 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
RFX1P22670 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX1P22670 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC17.04■□□□□ 0.32
RFX1P22670 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.04■□□□□ 0.32
RFX1P22670 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX1P22670 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX1P22670 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.04■□□□□ 0.32
RFX1P22670 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC17.04■□□□□ 0.32
RFX1P22670 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFX1P22670 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
RFX1P22670 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX1P22670 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.04■□□□□ 0.32
RFX1P22670 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC17.04■□□□□ 0.32
RFX1P22670 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX1P22670 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RFX1P22670 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX1P22670 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX1P22670 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RFX1P22670 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.04■□□□□ 0.32
RFX1P22670 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RFX1P22670 MIR658-201ENST00000385210 100 ntBASIC17.04■□□□□ 0.32
RFX1P22670 OSM-203ENST00000403463 464 ntTSL 3 BASIC17.04■□□□□ 0.32
RFX1P22670 MIR1909-201ENST00000411312 80 ntBASIC17.04■□□□□ 0.32
RFX1P22670 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC17.04■□□□□ 0.32
RFX1P22670 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC17.04■□□□□ 0.32
RFX1P22670 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
RFX1P22670 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17.04■□□□□ 0.32
RFX1P22670 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX1P22670 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC17.04■□□□□ 0.32
RFX1P22670 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC17.04■□□□□ 0.32
RFX1P22670 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFX1P22670 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFX1P22670 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RFX1P22670 POLE2-203ENST00000553805 496 ntTSL 2 BASIC17.04■□□□□ 0.32
RFX1P22670 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
RFX1P22670 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
RFX1P22670 RAB43P1-201ENST00000561790 589 ntBASIC17.04■□□□□ 0.32
RFX1P22670 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX1P22670 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX1P22670 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX1P22670 AL133215.2-201ENST00000609242 977 ntBASIC17.04■□□□□ 0.32
RFX1P22670 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX1P22670 KC6-207ENST00000600644 2311 ntTSL 3 BASIC17.04■□□□□ 0.32
RFX1P22670 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFX1P22670 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RFX1P22670 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX1P22670 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX1P22670 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX1P22670 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX1P22670 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.04■□□□□ 0.32
RFX1P22670 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX1P22670 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC17.04■□□□□ 0.32
RFX1P22670 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
RFX1P22670 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX1P22670 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX1P22670 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
RFX1P22670 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.03■□□□□ 0.32
RFX1P22670 KRT8P12-202ENST00000472924 1397 ntBASIC17.03■□□□□ 0.32
RFX1P22670 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
RFX1P22670 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms