Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 TSPY16P-201ENST00000449843 468 ntBASIC16.83■□□□□ 0.28
CD58P19256 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD58P19256 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD58P19256 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.83■□□□□ 0.28
CD58P19256 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CD58P19256 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.83■□□□□ 0.28
CD58P19256 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CD58P19256 TIMM17BP1-201ENST00000545713 516 ntBASIC16.83■□□□□ 0.28
CD58P19256 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.83■□□□□ 0.28
CD58P19256 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.83■□□□□ 0.28
CD58P19256 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CD58P19256 AL096865.1-201ENST00000606796 927 ntBASIC16.83■□□□□ 0.28
CD58P19256 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.83■□□□□ 0.28
CD58P19256 RNA5-8SN1-201ENST00000610460 153 ntBASIC16.83■□□□□ 0.28
CD58P19256 RNA5-8SN5-202ENST00000612463 153 ntBASIC16.83■□□□□ 0.28
CD58P19256 AC004790.1-201ENST00000612686 536 ntBASIC16.83■□□□□ 0.28
CD58P19256 RNA5-8SN4-201ENST00000613359 153 ntBASIC16.83■□□□□ 0.28
CD58P19256 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.83■□□□□ 0.28
CD58P19256 RNA5-8SN5-201ENST00000619471 153 ntBASIC16.83■□□□□ 0.28
CD58P19256 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CD58P19256 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD58P19256 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CD58P19256 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CD58P19256 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD58P19256 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD58P19256 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD58P19256 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD58P19256 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD58P19256 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.82■□□□□ 0.28
CD58P19256 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CD58P19256 AC090616.6-203ENST00000579186 1945 ntBASIC16.82■□□□□ 0.28
CD58P19256 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.82■□□□□ 0.28
CD58P19256 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD58P19256 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CD58P19256 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CD58P19256 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.82■□□□□ 0.28
CD58P19256 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.82■□□□□ 0.28
CD58P19256 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CD58P19256 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CD58P19256 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD58P19256 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD58P19256 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.82■□□□□ 0.28
CD58P19256 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.82■□□□□ 0.28
CD58P19256 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CD58P19256 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CD58P19256 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.82■□□□□ 0.28
CD58P19256 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD58P19256 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CD58P19256 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CD58P19256 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CD58P19256 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD58P19256 AC015922.1-201ENST00000421102 1152 ntBASIC16.82■□□□□ 0.28
CD58P19256 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC16.82■□□□□ 0.28
CD58P19256 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.82■□□□□ 0.28
CD58P19256 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CD58P19256 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.82■□□□□ 0.28
CD58P19256 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.82■□□□□ 0.28
CD58P19256 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
CD58P19256 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.82■□□□□ 0.28
CD58P19256 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC16.82■□□□□ 0.28
CD58P19256 PPT1-215ENST00000641471 2368 ntBASIC16.82■□□□□ 0.28
CD58P19256 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.82■□□□□ 0.28
CD58P19256 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.82■□□□□ 0.28
CD58P19256 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CD58P19256 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD58P19256 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD58P19256 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.82■□□□□ 0.28
CD58P19256 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD58P19256 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD58P19256 AC020658.6-201ENST00000623564 1870 ntBASIC16.82■□□□□ 0.28
CD58P19256 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CD58P19256 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD58P19256 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CD58P19256 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD58P19256 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CD58P19256 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.81■□□□□ 0.28
CD58P19256 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CD58P19256 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.81■□□□□ 0.28
CD58P19256 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.81■□□□□ 0.28
CD58P19256 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CD58P19256 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CD58P19256 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD58P19256 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD58P19256 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD58P19256 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CD58P19256 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CD58P19256 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.81■□□□□ 0.28
CD58P19256 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CD58P19256 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD58P19256 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.81■□□□□ 0.28
CD58P19256 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.81■□□□□ 0.28
CD58P19256 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CD58P19256 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD58P19256 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.81■□□□□ 0.28
CD58P19256 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD58P19256 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CD58P19256 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CD58P19256 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CD58P19256 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.81■□□□□ 0.28
CD58P19256 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms