Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN1P18031 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN1P18031 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
PTPN1P18031 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PTPN1P18031 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.55■□□□□ 0.24
PTPN1P18031 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN1P18031 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN1P18031 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.55■□□□□ 0.24
PTPN1P18031 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
PTPN1P18031 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN1P18031 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN1P18031 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN1P18031 AC105250.1-201ENST00000509378 2057 ntBASIC16.55■□□□□ 0.24
PTPN1P18031 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PTPN1P18031 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN1P18031 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN1P18031 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PTPN1P18031 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN1P18031 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PTPN1P18031 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPN1P18031 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.54■□□□□ 0.24
PTPN1P18031 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPN1P18031 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN1P18031 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN1P18031 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PTPN1P18031 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN1P18031 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PTPN1P18031 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PTPN1P18031 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PTPN1P18031 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.54■□□□□ 0.24
PTPN1P18031 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN1P18031 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PTPN1P18031 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.54■□□□□ 0.24
PTPN1P18031 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.54■□□□□ 0.24
PTPN1P18031 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPN1P18031 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PTPN1P18031 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.54■□□□□ 0.24
PTPN1P18031 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PTPN1P18031 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
PTPN1P18031 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
PTPN1P18031 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.54■□□□□ 0.24
PTPN1P18031 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.54■□□□□ 0.24
PTPN1P18031 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PTPN1P18031 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PTPN1P18031 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PTPN1P18031 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.54■□□□□ 0.24
PTPN1P18031 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
PTPN1P18031 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN1P18031 AC092850.2-201ENST00000623821 2697 ntBASIC16.54■□□□□ 0.24
PTPN1P18031 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.54■□□□□ 0.24
PTPN1P18031 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN1P18031 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.54■□□□□ 0.24
PTPN1P18031 AC009090.5-201ENST00000624886 2285 ntBASIC16.54■□□□□ 0.24
PTPN1P18031 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN1P18031 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.54■□□□□ 0.24
PTPN1P18031 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN1P18031 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.54■□□□□ 0.24
PTPN1P18031 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN1P18031 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PTPN1P18031 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.54■□□□□ 0.24
PTPN1P18031 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN1P18031 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.54■□□□□ 0.24
PTPN1P18031 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.54■□□□□ 0.24
PTPN1P18031 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PTPN1P18031 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN1P18031 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN1P18031 DRD5P1-201ENST00000456605 1438 ntBASIC16.53■□□□□ 0.24
PTPN1P18031 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPN1P18031 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN1P18031 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN1P18031 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN1P18031 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC16.53■□□□□ 0.24
PTPN1P18031 INTS4P2-202ENST00000614726 2019 ntBASIC16.53■□□□□ 0.24
PTPN1P18031 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PTPN1P18031 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PTPN1P18031 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN1P18031 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN1P18031 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
PTPN1P18031 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.53■□□□□ 0.24
PTPN1P18031 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN1P18031 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN1P18031 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PTPN1P18031 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN1P18031 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPN1P18031 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN1P18031 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPN1P18031 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN1P18031 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTPN1P18031 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PTPN1P18031 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPN1P18031 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPN1P18031 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPN1P18031 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC16.53■□□□□ 0.24
PTPN1P18031 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
PTPN1P18031 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.53■□□□□ 0.24
PTPN1P18031 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPN1P18031 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC16.53■□□□□ 0.24
PTPN1P18031 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.53■□□□□ 0.24
PTPN1P18031 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
PTPN1P18031 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms