Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
H2AFXP16104 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H2AFXP16104 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H2AFXP16104 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H2AFXP16104 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.26■□□□□ 0.19
H2AFXP16104 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
H2AFXP16104 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
H2AFXP16104 AC068587.6-202ENST00000641839 5619 ntBASIC16.26■□□□□ 0.19
H2AFXP16104 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.26■□□□□ 0.19
H2AFXP16104 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2AFXP16104 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.25■□□□□ 0.19
H2AFXP16104 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC16.25■□□□□ 0.19
H2AFXP16104 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2AFXP16104 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2AFXP16104 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.25■□□□□ 0.19
H2AFXP16104 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC16.25■□□□□ 0.19
H2AFXP16104 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2AFXP16104 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
H2AFXP16104 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
H2AFXP16104 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2AFXP16104 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.25■□□□□ 0.19
H2AFXP16104 ARMCX2-201ENST00000328766 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2AFXP16104 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.25■□□□□ 0.19
H2AFXP16104 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.25■□□□□ 0.19
H2AFXP16104 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.25■□□□□ 0.19
H2AFXP16104 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2AFXP16104 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
H2AFXP16104 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2AFXP16104 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2AFXP16104 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2AFXP16104 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2AFXP16104 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
H2AFXP16104 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
H2AFXP16104 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.25■□□□□ 0.19
H2AFXP16104 PMS2P4-201ENST00000412466 1052 ntBASIC16.25■□□□□ 0.19
H2AFXP16104 POM121L3P-201ENST00000419331 1163 ntBASIC16.25■□□□□ 0.19
H2AFXP16104 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
H2AFXP16104 GHSR-202ENST00000427970 912 ntBASIC16.25■□□□□ 0.19
H2AFXP16104 CHCHD2P8-201ENST00000429873 447 ntBASIC16.25■□□□□ 0.19
H2AFXP16104 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.25■□□□□ 0.19
H2AFXP16104 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.25■□□□□ 0.19
H2AFXP16104 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC16.25■□□□□ 0.19
H2AFXP16104 AC139887.3-201ENST00000568585 713 ntBASIC16.25■□□□□ 0.19
H2AFXP16104 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.25■□□□□ 0.19
H2AFXP16104 NKAPP1-205ENST00000585790 367 ntBASIC16.25■□□□□ 0.19
H2AFXP16104 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
H2AFXP16104 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2AFXP16104 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2AFXP16104 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
H2AFXP16104 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2AFXP16104 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2AFXP16104 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
H2AFXP16104 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
H2AFXP16104 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC16.25■□□□□ 0.19
H2AFXP16104 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
H2AFXP16104 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
H2AFXP16104 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
H2AFXP16104 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC16.25■□□□□ 0.19
H2AFXP16104 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
H2AFXP16104 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2AFXP16104 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
H2AFXP16104 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2AFXP16104 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2AFXP16104 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
H2AFXP16104 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
H2AFXP16104 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2AFXP16104 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2AFXP16104 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
H2AFXP16104 AC004241.5-201ENST00000623870 2448 ntBASIC16.24■□□□□ 0.19
H2AFXP16104 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
H2AFXP16104 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2AFXP16104 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC16.24■□□□□ 0.19
H2AFXP16104 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.24■□□□□ 0.19
H2AFXP16104 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
H2AFXP16104 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2AFXP16104 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
H2AFXP16104 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
H2AFXP16104 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
H2AFXP16104 AP001269.4-201ENST00000609611 512 ntBASIC16.24■□□□□ 0.19
H2AFXP16104 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2AFXP16104 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2AFXP16104 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
H2AFXP16104 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
H2AFXP16104 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2AFXP16104 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
H2AFXP16104 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2AFXP16104 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
H2AFXP16104 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2AFXP16104 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
H2AFXP16104 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC16.24■□□□□ 0.19
H2AFXP16104 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC16.24■□□□□ 0.19
H2AFXP16104 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
H2AFXP16104 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2AFXP16104 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
H2AFXP16104 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC16.24■□□□□ 0.19
H2AFXP16104 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.24■□□□□ 0.19
H2AFXP16104 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
H2AFXP16104 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
H2AFXP16104 AL139385.1-201ENST00000611744 3272 ntBASIC16.23■□□□□ 0.19
H2AFXP16104 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms