Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RETP07949 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RETP07949 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
RETP07949 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RETP07949 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC15.78■□□□□ 0.12
RETP07949 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RETP07949 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RETP07949 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RETP07949 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.78■□□□□ 0.12
RETP07949 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RETP07949 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.78■□□□□ 0.12
RETP07949 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RETP07949 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RETP07949 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RETP07949 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RETP07949 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RETP07949 MIR663B-201ENST00000408361 115 ntBASIC15.78■□□□□ 0.12
RETP07949 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RETP07949 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.78■□□□□ 0.12
RETP07949 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC15.78■□□□□ 0.12
RETP07949 RPL13P2-201ENST00000440687 659 ntBASIC15.78■□□□□ 0.12
RETP07949 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RETP07949 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.78■□□□□ 0.12
RETP07949 KRT90P-201ENST00000549264 1064 ntBASIC15.78■□□□□ 0.12
RETP07949 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC15.78■□□□□ 0.12
RETP07949 AL603832.2-201ENST00000566195 2125 ntBASIC15.78■□□□□ 0.12
RETP07949 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC15.78■□□□□ 0.12
RETP07949 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC15.78■□□□□ 0.12
RETP07949 AC016629.1-201ENST00000596579 586 ntBASIC15.78■□□□□ 0.12
RETP07949 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.78■□□□□ 0.12
RETP07949 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RETP07949 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RETP07949 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC15.78■□□□□ 0.12
RETP07949 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RETP07949 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.78■□□□□ 0.12
RETP07949 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.78■□□□□ 0.12
RETP07949 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC15.78■□□□□ 0.12
RETP07949 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.78■□□□□ 0.12
RETP07949 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RETP07949 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.78■□□□□ 0.12
RETP07949 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RETP07949 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
RETP07949 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RETP07949 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RETP07949 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.77■□□□□ 0.12
RETP07949 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.77■□□□□ 0.12
RETP07949 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.77■□□□□ 0.12
RETP07949 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RETP07949 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RETP07949 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RETP07949 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RETP07949 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RETP07949 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.77■□□□□ 0.12
RETP07949 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC15.77■□□□□ 0.12
RETP07949 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RETP07949 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC15.77■□□□□ 0.12
RETP07949 C2orf27AP3-201ENST00000434123 579 ntBASIC15.77■□□□□ 0.12
RETP07949 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RETP07949 AC104306.2-201ENST00000451877 341 ntBASIC15.77■□□□□ 0.12
RETP07949 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.77■□□□□ 0.12
RETP07949 AKR7A2P1-201ENST00000460134 915 ntBASIC15.77■□□□□ 0.12
RETP07949 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC15.77■□□□□ 0.12
RETP07949 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.77■□□□□ 0.12
RETP07949 AP001063.1-201ENST00000568332 529 ntBASIC15.77■□□□□ 0.12
RETP07949 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RETP07949 SPIB-207ENST00000597855 564 ntTSL 4 BASIC15.77■□□□□ 0.12
RETP07949 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.77■□□□□ 0.12
RETP07949 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RETP07949 AC244669.2-201ENST00000612320 853 ntBASIC15.77■□□□□ 0.12
RETP07949 AL354718.3-201ENST00000616414 581 ntBASIC15.77■□□□□ 0.12
RETP07949 CR382287.1-201ENST00000623954 586 ntBASIC15.77■□□□□ 0.12
RETP07949 SNX1-214ENST00000625244 324 ntTSL 5 BASIC15.77■□□□□ 0.12
RETP07949 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC15.77■□□□□ 0.12
RETP07949 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RETP07949 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
RETP07949 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RETP07949 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC15.77■□□□□ 0.11
RETP07949 AL607033.1-201ENST00000623900 1599 ntBASIC15.77■□□□□ 0.11
RETP07949 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
RETP07949 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RETP07949 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RETP07949 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RETP07949 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RETP07949 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
RETP07949 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
RETP07949 AL136982.4-201ENST00000437689 1740 ntBASIC15.77■□□□□ 0.11
RETP07949 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
RETP07949 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RETP07949 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RETP07949 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.76■□□□□ 0.11
RETP07949 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RETP07949 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.76■□□□□ 0.11
RETP07949 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RETP07949 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.76■□□□□ 0.11
RETP07949 RERG-209ENST00000546331 1383 ntTSL 2 BASIC15.76■□□□□ 0.11
RETP07949 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RETP07949 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.76■□□□□ 0.11
RETP07949 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RETP07949 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RETP07949 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 62.7 ms