Protein–RNA interactions for Protein: P04908

HIST1H2AB, Histone H2A type 1-B/E, humanhuman

Predictions only

Length 130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2ABP04908 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
HIST1H2ABP04908 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H2ABP04908 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC14.35□□□□□ -0.11
HIST1H2ABP04908 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H2ABP04908 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST1H2ABP04908 BX842568.4-201ENST00000421222 227 ntBASIC14.35□□□□□ -0.11
HIST1H2ABP04908 RBPMS2P1-201ENST00000437762 623 ntBASIC14.35□□□□□ -0.11
HIST1H2ABP04908 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H2ABP04908 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST1H2ABP04908 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.35□□□□□ -0.11
HIST1H2ABP04908 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H2ABP04908 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST1H2ABP04908 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST1H2ABP04908 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.35□□□□□ -0.11
HIST1H2ABP04908 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC14.35□□□□□ -0.11
HIST1H2ABP04908 MIR4313-201ENST00000580760 101 ntBASIC14.35□□□□□ -0.11
HIST1H2ABP04908 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.35□□□□□ -0.11
HIST1H2ABP04908 AC010327.4-202ENST00000591484 748 ntBASIC14.35□□□□□ -0.11
HIST1H2ABP04908 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.35□□□□□ -0.11
HIST1H2ABP04908 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H2ABP04908 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC14.35□□□□□ -0.11
HIST1H2ABP04908 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H2ABP04908 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H2ABP04908 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H2ABP04908 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST1H2ABP04908 TCAF2P1-201ENST00000291129 2421 ntBASIC14.35□□□□□ -0.11
HIST1H2ABP04908 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H2ABP04908 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H2ABP04908 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H2ABP04908 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H2ABP04908 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.35□□□□□ -0.11
HIST1H2ABP04908 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H2ABP04908 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H2ABP04908 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
HIST1H2ABP04908 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
HIST1H2ABP04908 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
HIST1H2ABP04908 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
HIST1H2ABP04908 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.34□□□□□ -0.11
HIST1H2ABP04908 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.34□□□□□ -0.11
HIST1H2ABP04908 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H2ABP04908 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.34□□□□□ -0.11
HIST1H2ABP04908 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H2ABP04908 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.34□□□□□ -0.11
HIST1H2ABP04908 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H2ABP04908 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H2ABP04908 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H2ABP04908 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H2ABP04908 AC004461.1-201ENST00000412461 403 ntBASIC14.34□□□□□ -0.11
HIST1H2ABP04908 AL627223.1-201ENST00000416693 442 ntBASIC14.34□□□□□ -0.11
HIST1H2ABP04908 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.34□□□□□ -0.11
HIST1H2ABP04908 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.34□□□□□ -0.11
HIST1H2ABP04908 AC112482.1-201ENST00000492080 688 ntBASIC14.34□□□□□ -0.11
HIST1H2ABP04908 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
HIST1H2ABP04908 YBX1P5-201ENST00000509441 847 ntBASIC14.34□□□□□ -0.11
HIST1H2ABP04908 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.34□□□□□ -0.11
HIST1H2ABP04908 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.34□□□□□ -0.11
HIST1H2ABP04908 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HIST1H2ABP04908 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H2ABP04908 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
HIST1H2ABP04908 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H2ABP04908 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H2ABP04908 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC14.34□□□□□ -0.11
HIST1H2ABP04908 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H2ABP04908 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H2ABP04908 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H2ABP04908 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
HIST1H2ABP04908 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.34□□□□□ -0.11
HIST1H2ABP04908 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H2ABP04908 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.34□□□□□ -0.11
HIST1H2ABP04908 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
HIST1H2ABP04908 AC105250.1-201ENST00000509378 2057 ntBASIC14.34□□□□□ -0.11
HIST1H2ABP04908 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
HIST1H2ABP04908 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
HIST1H2ABP04908 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
HIST1H2ABP04908 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
HIST1H2ABP04908 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
HIST1H2ABP04908 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
HIST1H2ABP04908 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
HIST1H2ABP04908 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
HIST1H2ABP04908 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H2ABP04908 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H2ABP04908 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H2ABP04908 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
HIST1H2ABP04908 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H2ABP04908 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H2ABP04908 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H2ABP04908 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H2ABP04908 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.33□□□□□ -0.12
HIST1H2ABP04908 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H2ABP04908 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H2ABP04908 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
HIST1H2ABP04908 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H2ABP04908 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
HIST1H2ABP04908 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC14.33□□□□□ -0.12
HIST1H2ABP04908 UPF3AP3-201ENST00000420996 769 ntBASIC14.33□□□□□ -0.12
HIST1H2ABP04908 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.33□□□□□ -0.12
HIST1H2ABP04908 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.33□□□□□ -0.12
HIST1H2ABP04908 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.33□□□□□ -0.12
HIST1H2ABP04908 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
HIST1H2ABP04908 AC105021.1-202ENST00000570572 669 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms