Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.83■□□□□ 0.28
TUBB4AP04350 MTHFR-210ENST00000641407 2387 ntBASIC16.83■□□□□ 0.28
TUBB4AP04350 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TUBB4AP04350 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TUBB4AP04350 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TUBB4AP04350 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC16.83■□□□□ 0.28
TUBB4AP04350 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC16.82■□□□□ 0.28
TUBB4AP04350 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC16.82■□□□□ 0.28
TUBB4AP04350 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBB4AP04350 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TUBB4AP04350 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBB4AP04350 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.82■□□□□ 0.28
TUBB4AP04350 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TUBB4AP04350 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBB4AP04350 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC16.82■□□□□ 0.28
TUBB4AP04350 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
TUBB4AP04350 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBB4AP04350 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
TUBB4AP04350 EMD-201ENST00000369835 966 ntTSL 3 BASIC16.82■□□□□ 0.28
TUBB4AP04350 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBB4AP04350 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.82■□□□□ 0.28
TUBB4AP04350 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
TUBB4AP04350 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.82■□□□□ 0.28
TUBB4AP04350 MTDHP3-201ENST00000594186 672 ntBASIC16.82■□□□□ 0.28
TUBB4AP04350 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.82■□□□□ 0.28
TUBB4AP04350 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.82■□□□□ 0.28
TUBB4AP04350 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC16.82■□□□□ 0.28
TUBB4AP04350 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC16.82■□□□□ 0.28
TUBB4AP04350 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBB4AP04350 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC16.82■□□□□ 0.28
TUBB4AP04350 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC16.82■□□□□ 0.28
TUBB4AP04350 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.82■□□□□ 0.28
TUBB4AP04350 AC011474.4-201ENST00000623523 2076 ntBASIC16.82■□□□□ 0.28
TUBB4AP04350 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBB4AP04350 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
TUBB4AP04350 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
TUBB4AP04350 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TUBB4AP04350 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TUBB4AP04350 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TUBB4AP04350 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC16.82■□□□□ 0.28
TUBB4AP04350 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TUBB4AP04350 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
TUBB4AP04350 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TUBB4AP04350 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
TUBB4AP04350 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TUBB4AP04350 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TUBB4AP04350 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBB4AP04350 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBB4AP04350 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBB4AP04350 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC16.81■□□□□ 0.28
TUBB4AP04350 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBB4AP04350 AC126335.2-201ENST00000623362 4637 ntBASIC16.81■□□□□ 0.28
TUBB4AP04350 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBB4AP04350 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBB4AP04350 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.81■□□□□ 0.28
TUBB4AP04350 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.81■□□□□ 0.28
TUBB4AP04350 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBB4AP04350 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBB4AP04350 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC16.81■□□□□ 0.28
TUBB4AP04350 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.81■□□□□ 0.28
TUBB4AP04350 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBB4AP04350 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
TUBB4AP04350 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
TUBB4AP04350 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBB4AP04350 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TUBB4AP04350 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC16.81■□□□□ 0.28
TUBB4AP04350 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBB4AP04350 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBB4AP04350 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
TUBB4AP04350 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TUBB4AP04350 GHSR-202ENST00000427970 912 ntBASIC16.81■□□□□ 0.28
TUBB4AP04350 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBB4AP04350 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.81■□□□□ 0.28
TUBB4AP04350 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.81■□□□□ 0.28
TUBB4AP04350 IGHV3-65-201ENST00000523210 341 ntBASIC16.81■□□□□ 0.28
TUBB4AP04350 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.81■□□□□ 0.28
TUBB4AP04350 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.81■□□□□ 0.28
TUBB4AP04350 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.81■□□□□ 0.28
TUBB4AP04350 ACTL9-202ENST00000612068 1252 ntBASIC16.81■□□□□ 0.28
TUBB4AP04350 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.81■□□□□ 0.28
TUBB4AP04350 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC16.81■□□□□ 0.28
TUBB4AP04350 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.81■□□□□ 0.28
TUBB4AP04350 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.81■□□□□ 0.28
TUBB4AP04350 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBB4AP04350 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBB4AP04350 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBB4AP04350 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBB4AP04350 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBB4AP04350 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.81■□□□□ 0.28
TUBB4AP04350 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBB4AP04350 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.81■□□□□ 0.28
TUBB4AP04350 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBB4AP04350 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
TUBB4AP04350 AC015656.1-201ENST00000624209 3578 ntBASIC16.81■□□□□ 0.28
TUBB4AP04350 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TUBB4AP04350 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TUBB4AP04350 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TUBB4AP04350 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC16.8■□□□□ 0.28
TUBB4AP04350 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TUBB4AP04350 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms