Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC14.86□□□□□ -0.03
MT-ND1P03886 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
MT-ND1P03886 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.86□□□□□ -0.03
MT-ND1P03886 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
MT-ND1P03886 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.86□□□□□ -0.03
MT-ND1P03886 Z83851.2-201ENST00000609564 659 ntBASIC14.86□□□□□ -0.03
MT-ND1P03886 AL078644.1-201ENST00000609881 752 ntBASIC14.86□□□□□ -0.03
MT-ND1P03886 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC14.86□□□□□ -0.03
MT-ND1P03886 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.86□□□□□ -0.03
MT-ND1P03886 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
MT-ND1P03886 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MT-ND1P03886 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.86□□□□□ -0.03
MT-ND1P03886 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
MT-ND1P03886 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MT-ND1P03886 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
MT-ND1P03886 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
MT-ND1P03886 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
MT-ND1P03886 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.86□□□□□ -0.03
MT-ND1P03886 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
MT-ND1P03886 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
MT-ND1P03886 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.86□□□□□ -0.03
MT-ND1P03886 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
MT-ND1P03886 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14.86□□□□□ -0.03
MT-ND1P03886 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
MT-ND1P03886 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MT-ND1P03886 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MT-ND1P03886 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MT-ND1P03886 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MT-ND1P03886 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.85□□□□□ -0.03
MT-ND1P03886 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
MT-ND1P03886 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
MT-ND1P03886 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MT-ND1P03886 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MT-ND1P03886 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.85□□□□□ -0.03
MT-ND1P03886 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MT-ND1P03886 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
MT-ND1P03886 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MT-ND1P03886 AC140479.7-201ENST00000636301 2332 ntBASIC14.85□□□□□ -0.03
MT-ND1P03886 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
MT-ND1P03886 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.85□□□□□ -0.03
MT-ND1P03886 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MT-ND1P03886 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.85□□□□□ -0.03
MT-ND1P03886 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MT-ND1P03886 AC002347.1-201ENST00000569543 541 ntBASIC14.85□□□□□ -0.03
MT-ND1P03886 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.85□□□□□ -0.03
MT-ND1P03886 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.85□□□□□ -0.03
MT-ND1P03886 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
MT-ND1P03886 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MT-ND1P03886 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
MT-ND1P03886 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MT-ND1P03886 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
MT-ND1P03886 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.85□□□□□ -0.03
MT-ND1P03886 HLA-A-201ENST00000376802 1334 ntBASIC14.85□□□□□ -0.03
MT-ND1P03886 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.85□□□□□ -0.03
MT-ND1P03886 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MT-ND1P03886 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
MT-ND1P03886 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
MT-ND1P03886 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.85□□□□□ -0.03
MT-ND1P03886 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
MT-ND1P03886 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
MT-ND1P03886 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
MT-ND1P03886 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
MT-ND1P03886 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
MT-ND1P03886 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
MT-ND1P03886 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.84□□□□□ -0.03
MT-ND1P03886 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MT-ND1P03886 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.84□□□□□ -0.03
MT-ND1P03886 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.84□□□□□ -0.03
MT-ND1P03886 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
MT-ND1P03886 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
MT-ND1P03886 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.84□□□□□ -0.03
MT-ND1P03886 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
MT-ND1P03886 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MT-ND1P03886 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MT-ND1P03886 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC14.84□□□□□ -0.03
MT-ND1P03886 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MT-ND1P03886 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.84□□□□□ -0.03
MT-ND1P03886 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MT-ND1P03886 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
MT-ND1P03886 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MT-ND1P03886 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MT-ND1P03886 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC14.84□□□□□ -0.03
MT-ND1P03886 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MT-ND1P03886 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
MT-ND1P03886 AC092474.2-201ENST00000424288 719 ntBASIC14.84□□□□□ -0.03
MT-ND1P03886 TPM4P1-201ENST00000436100 807 ntBASIC14.84□□□□□ -0.03
MT-ND1P03886 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
MT-ND1P03886 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.84□□□□□ -0.03
MT-ND1P03886 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.84□□□□□ -0.03
MT-ND1P03886 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.84□□□□□ -0.03
MT-ND1P03886 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.84□□□□□ -0.03
MT-ND1P03886 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
MT-ND1P03886 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
MT-ND1P03886 AQP6-205ENST00000618286 829 ntTSL 5 BASIC14.84□□□□□ -0.03
MT-ND1P03886 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC14.84□□□□□ -0.03
MT-ND1P03886 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.84□□□□□ -0.03
MT-ND1P03886 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
MT-ND1P03886 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
MT-ND1P03886 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.84□□□□□ -0.03
MT-ND1P03886 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms