Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC13.31□□□□□ -0.28
HLA-AP01891 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC13.31□□□□□ -0.28
HLA-AP01891 AC021097.1-201ENST00000607902 574 ntBASIC13.31□□□□□ -0.28
HLA-AP01891 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.31□□□□□ -0.28
HLA-AP01891 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.31□□□□□ -0.28
HLA-AP01891 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-AP01891 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-AP01891 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-AP01891 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-AP01891 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-AP01891 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC13.31□□□□□ -0.28
HLA-AP01891 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-AP01891 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC13.31□□□□□ -0.28
HLA-AP01891 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-AP01891 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.31□□□□□ -0.28
HLA-AP01891 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
HLA-AP01891 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.31□□□□□ -0.28
HLA-AP01891 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-AP01891 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-AP01891 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-AP01891 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-AP01891 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-AP01891 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-AP01891 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-AP01891 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-AP01891 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-AP01891 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-AP01891 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-AP01891 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-AP01891 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC13.3□□□□□ -0.28
HLA-AP01891 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-AP01891 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-AP01891 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.3□□□□□ -0.28
HLA-AP01891 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-AP01891 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-AP01891 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.3□□□□□ -0.28
HLA-AP01891 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-AP01891 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC13.3□□□□□ -0.28
HLA-AP01891 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-AP01891 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-AP01891 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
HLA-AP01891 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-AP01891 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
HLA-AP01891 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-AP01891 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-AP01891 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-AP01891 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-AP01891 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.3□□□□□ -0.28
HLA-AP01891 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-AP01891 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-AP01891 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
HLA-AP01891 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-AP01891 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC13.3□□□□□ -0.28
HLA-AP01891 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC13.3□□□□□ -0.28
HLA-AP01891 FAM197Y8-203ENST00000450145 560 ntBASIC13.3□□□□□ -0.28
HLA-AP01891 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.3□□□□□ -0.28
HLA-AP01891 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC13.3□□□□□ -0.28
HLA-AP01891 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-AP01891 MSRA-206ENST00000521209 814 ntTSL 3 BASIC13.3□□□□□ -0.28
HLA-AP01891 AC139887.3-201ENST00000568585 713 ntBASIC13.3□□□□□ -0.28
HLA-AP01891 RNF151-202ENST00000569210 853 ntTSL 2 BASIC13.3□□□□□ -0.28
HLA-AP01891 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC13.3□□□□□ -0.28
HLA-AP01891 SDCCAG3P1-201ENST00000589292 1150 ntBASIC13.3□□□□□ -0.28
HLA-AP01891 AL121912.1-201ENST00000603683 238 ntBASIC13.3□□□□□ -0.28
HLA-AP01891 AL031008.1-201ENST00000619963 541 ntBASIC13.3□□□□□ -0.28
HLA-AP01891 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.3□□□□□ -0.28
HLA-AP01891 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
HLA-AP01891 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-AP01891 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-AP01891 ZBED1P1-201ENST00000502364 1930 ntBASIC13.3□□□□□ -0.28
HLA-AP01891 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-AP01891 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
HLA-AP01891 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-AP01891 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC13.3□□□□□ -0.28
HLA-AP01891 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.3□□□□□ -0.28
HLA-AP01891 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-AP01891 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-AP01891 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-AP01891 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-AP01891 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-AP01891 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-AP01891 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
HLA-AP01891 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC13.29□□□□□ -0.28
HLA-AP01891 AC127383.1-201ENST00000444697 1800 ntBASIC13.29□□□□□ -0.28
HLA-AP01891 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-AP01891 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-AP01891 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.29□□□□□ -0.28
HLA-AP01891 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-AP01891 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HLA-AP01891 AC012569.1-201ENST00000591191 1524 ntBASIC13.29□□□□□ -0.28
HLA-AP01891 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
HLA-AP01891 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.29□□□□□ -0.28
HLA-AP01891 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC13.29□□□□□ -0.28
HLA-AP01891 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-AP01891 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-AP01891 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
HLA-AP01891 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HLA-AP01891 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
HLA-AP01891 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
HLA-AP01891 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 59.1 ms