Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.16
MT-CO1P00395 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MT-CO1P00395 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MT-CO1P00395 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.08■□□□□ 0.16
MT-CO1P00395 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.08■□□□□ 0.16
MT-CO1P00395 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.08■□□□□ 0.16
MT-CO1P00395 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MT-CO1P00395 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
MT-CO1P00395 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
MT-CO1P00395 USP40-206ENST00000443711 628 ntTSL 2 BASIC16.08■□□□□ 0.16
MT-CO1P00395 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
MT-CO1P00395 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
MT-CO1P00395 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.08■□□□□ 0.16
MT-CO1P00395 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.08■□□□□ 0.16
MT-CO1P00395 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.08■□□□□ 0.16
MT-CO1P00395 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
MT-CO1P00395 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MT-CO1P00395 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.08■□□□□ 0.16
MT-CO1P00395 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.08■□□□□ 0.16
MT-CO1P00395 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC16.08■□□□□ 0.16
MT-CO1P00395 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.08■□□□□ 0.16
MT-CO1P00395 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
MT-CO1P00395 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
MT-CO1P00395 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
MT-CO1P00395 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
MT-CO1P00395 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.08■□□□□ 0.16
MT-CO1P00395 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
MT-CO1P00395 AC103702.1-201ENST00000548801 2630 ntBASIC16.08■□□□□ 0.16
MT-CO1P00395 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.08■□□□□ 0.16
MT-CO1P00395 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
MT-CO1P00395 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
MT-CO1P00395 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.08■□□□□ 0.16
MT-CO1P00395 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
MT-CO1P00395 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.07■□□□□ 0.16
MT-CO1P00395 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MT-CO1P00395 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
MT-CO1P00395 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.07■□□□□ 0.16
MT-CO1P00395 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MT-CO1P00395 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
MT-CO1P00395 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MT-CO1P00395 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MT-CO1P00395 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MT-CO1P00395 DGCR5-201ENST00000399539 862 ntBASIC16.07■□□□□ 0.16
MT-CO1P00395 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.07■□□□□ 0.16
MT-CO1P00395 AC098850.1-201ENST00000419919 790 ntBASIC16.07■□□□□ 0.16
MT-CO1P00395 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.07■□□□□ 0.16
MT-CO1P00395 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC16.07■□□□□ 0.16
MT-CO1P00395 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
MT-CO1P00395 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MT-CO1P00395 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MT-CO1P00395 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
MT-CO1P00395 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
MT-CO1P00395 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.07■□□□□ 0.16
MT-CO1P00395 AC008494.3-201ENST00000606615 944 ntBASIC16.07■□□□□ 0.16
MT-CO1P00395 MIR8072-201ENST00000614241 80 ntBASIC16.07■□□□□ 0.16
MT-CO1P00395 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MT-CO1P00395 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MT-CO1P00395 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.07■□□□□ 0.16
MT-CO1P00395 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MT-CO1P00395 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.07■□□□□ 0.16
MT-CO1P00395 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MT-CO1P00395 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.07■□□□□ 0.16
MT-CO1P00395 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.07■□□□□ 0.16
MT-CO1P00395 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
MT-CO1P00395 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MT-CO1P00395 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
MT-CO1P00395 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MT-CO1P00395 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
MT-CO1P00395 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MT-CO1P00395 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MT-CO1P00395 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MT-CO1P00395 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
MT-CO1P00395 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MT-CO1P00395 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MT-CO1P00395 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MT-CO1P00395 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
MT-CO1P00395 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MT-CO1P00395 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MT-CO1P00395 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
MT-CO1P00395 AL391825.1-201ENST00000457671 1364 ntBASIC16.06■□□□□ 0.16
MT-CO1P00395 AC087499.6-201ENST00000411576 835 ntBASIC16.06■□□□□ 0.16
MT-CO1P00395 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.06■□□□□ 0.16
MT-CO1P00395 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.06■□□□□ 0.16
MT-CO1P00395 AC055876.2-201ENST00000531834 546 ntBASIC16.06■□□□□ 0.16
MT-CO1P00395 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.06■□□□□ 0.16
MT-CO1P00395 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC16.06■□□□□ 0.16
MT-CO1P00395 AL596325.1-201ENST00000563991 1082 ntBASIC16.06■□□□□ 0.16
MT-CO1P00395 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16.06■□□□□ 0.16
MT-CO1P00395 AC140912.1-201ENST00000577171 1054 ntBASIC16.06■□□□□ 0.16
MT-CO1P00395 AL391069.4-201ENST00000609583 481 ntBASIC16.06■□□□□ 0.16
MT-CO1P00395 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
MT-CO1P00395 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MT-CO1P00395 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
MT-CO1P00395 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.06■□□□□ 0.16
MT-CO1P00395 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
MT-CO1P00395 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
MT-CO1P00395 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
MT-CO1P00395 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC16.06■□□□□ 0.16
MT-CO1P00395 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.06■□□□□ 0.16
MT-CO1P00395 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms