Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
CLOCKO15516 AP001282.1-201ENST00000531301 1499 ntBASIC14.98□□□□□ -0.01
CLOCKO15516 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
CLOCKO15516 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.98□□□□□ -0.01
CLOCKO15516 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.98□□□□□ -0.01
CLOCKO15516 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.98□□□□□ -0.01
CLOCKO15516 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC14.98□□□□□ -0.01
CLOCKO15516 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.98□□□□□ -0.01
CLOCKO15516 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.98□□□□□ -0.01
CLOCKO15516 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
CLOCKO15516 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLOCKO15516 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLOCKO15516 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.98□□□□□ -0.01
CLOCKO15516 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLOCKO15516 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CLOCKO15516 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLOCKO15516 ZEB1-AS1-208ENST00000607166 2503 ntBASIC14.98□□□□□ -0.01
CLOCKO15516 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.98□□□□□ -0.01
CLOCKO15516 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC14.98□□□□□ -0.01
CLOCKO15516 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLOCKO15516 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLOCKO15516 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLOCKO15516 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLOCKO15516 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLOCKO15516 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
CLOCKO15516 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
CLOCKO15516 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
CLOCKO15516 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC14.97□□□□□ -0.01
CLOCKO15516 AC009090.5-201ENST00000624886 2285 ntBASIC14.97□□□□□ -0.01
CLOCKO15516 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.97□□□□□ -0.01
CLOCKO15516 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.97□□□□□ -0.01
CLOCKO15516 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLOCKO15516 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLOCKO15516 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLOCKO15516 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.97□□□□□ -0.01
CLOCKO15516 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
CLOCKO15516 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLOCKO15516 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLOCKO15516 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLOCKO15516 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLOCKO15516 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.97□□□□□ -0.01
CLOCKO15516 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLOCKO15516 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLOCKO15516 AC005840.4-201ENST00000541242 2494 ntBASIC14.97□□□□□ -0.01
CLOCKO15516 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLOCKO15516 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLOCKO15516 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLOCKO15516 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLOCKO15516 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
CLOCKO15516 RPSAP43-201ENST00000402237 625 ntBASIC14.97□□□□□ -0.01
CLOCKO15516 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLOCKO15516 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.97□□□□□ -0.01
CLOCKO15516 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.97□□□□□ -0.01
CLOCKO15516 VN2R19P-201ENST00000442399 1052 ntBASIC14.97□□□□□ -0.01
CLOCKO15516 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLOCKO15516 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
CLOCKO15516 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.97□□□□□ -0.01
CLOCKO15516 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLOCKO15516 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLOCKO15516 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC14.97□□□□□ -0.01
CLOCKO15516 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.97□□□□□ -0.01
CLOCKO15516 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.97□□□□□ -0.01
CLOCKO15516 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC14.97□□□□□ -0.01
CLOCKO15516 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.97□□□□□ -0.01
CLOCKO15516 AC018845.2-201ENST00000568326 409 ntBASIC14.97□□□□□ -0.01
CLOCKO15516 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC14.97□□□□□ -0.01
CLOCKO15516 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLOCKO15516 AC055717.3-201ENST00000622967 595 ntBASIC14.97□□□□□ -0.01
CLOCKO15516 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CLOCKO15516 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.97□□□□□ -0.01
CLOCKO15516 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLOCKO15516 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLOCKO15516 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLOCKO15516 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC14.97□□□□□ -0.01
CLOCKO15516 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CLOCKO15516 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.97□□□□□ -0.01
CLOCKO15516 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CLOCKO15516 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
CLOCKO15516 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
CLOCKO15516 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLOCKO15516 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLOCKO15516 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.97□□□□□ -0.01
CLOCKO15516 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CLOCKO15516 AL122018.1-201ENST00000446607 2310 ntBASIC14.97□□□□□ -0.01
CLOCKO15516 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CLOCKO15516 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.97□□□□□ -0.01
CLOCKO15516 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.97□□□□□ -0.01
CLOCKO15516 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLOCKO15516 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CLOCKO15516 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLOCKO15516 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLOCKO15516 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CLOCKO15516 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLOCKO15516 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLOCKO15516 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLOCKO15516 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.96□□□□□ -0.01
CLOCKO15516 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC14.96□□□□□ -0.01
CLOCKO15516 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CLOCKO15516 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLOCKO15516 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms