Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC26.09■■□□□ 1.77
CUX2O14529 STK16-203ENST00000409516 895 ntTSL 2 BASIC26.09■■□□□ 1.77
CUX2O14529 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
CUX2O14529 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC26.09■■□□□ 1.77
CUX2O14529 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC26.09■■□□□ 1.77
CUX2O14529 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC26.09■■□□□ 1.77
CUX2O14529 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC26.09■■□□□ 1.77
CUX2O14529 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
CUX2O14529 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC26.08■■□□□ 1.77
CUX2O14529 ABR-203ENST00000536794 2213 ntTSL 2 BASIC26.08■■□□□ 1.77
CUX2O14529 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CUX2O14529 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC26.08■■□□□ 1.77
CUX2O14529 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
CUX2O14529 AL139094.1-201ENST00000405549 1188 ntBASIC26.08■■□□□ 1.77
CUX2O14529 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CUX2O14529 AQP7P5-201ENST00000428759 1049 ntBASIC26.08■■□□□ 1.77
CUX2O14529 EIF3FP3-201ENST00000434851 1086 ntBASIC26.08■■□□□ 1.77
CUX2O14529 AQP7P4-201ENST00000447083 1042 ntBASIC26.08■■□□□ 1.77
CUX2O14529 AC053503.3-201ENST00000448375 114 ntBASIC26.08■■□□□ 1.77
CUX2O14529 AQP7P2-201ENST00000453967 1041 ntBASIC26.08■■□□□ 1.77
CUX2O14529 RN7SL81P-201ENST00000493781 261 ntBASIC26.08■■□□□ 1.77
CUX2O14529 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC26.08■■□□□ 1.77
CUX2O14529 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
CUX2O14529 CR392039.1-201ENST00000623217 204 ntBASIC26.08■■□□□ 1.77
CUX2O14529 AQP7P3-201ENST00000624547 1041 ntBASIC26.08■■□□□ 1.77
CUX2O14529 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
CUX2O14529 AC005332.8-201ENST00000622750 2735 ntBASIC26.08■■□□□ 1.77
CUX2O14529 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
CUX2O14529 TAGLN3-201ENST00000273368 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
CUX2O14529 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.76
CUX2O14529 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC26.08■■□□□ 1.76
CUX2O14529 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
CUX2O14529 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CUX2O14529 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CUX2O14529 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC26.07■■□□□ 1.76
CUX2O14529 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
CUX2O14529 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CUX2O14529 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
CUX2O14529 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CUX2O14529 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC26.07■■□□□ 1.76
CUX2O14529 KRT8P14-201ENST00000414254 1442 ntBASIC26.07■■□□□ 1.76
CUX2O14529 MCC-208ENST00000514701 2855 ntTSL 2 BASIC26.07■■□□□ 1.76
CUX2O14529 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC26.07■■□□□ 1.76
CUX2O14529 THY1-209ENST00000580275 578 ntTSL 3 BASIC26.07■■□□□ 1.76
CUX2O14529 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC26.07■■□□□ 1.76
CUX2O14529 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CUX2O14529 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CUX2O14529 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
CUX2O14529 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CUX2O14529 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
CUX2O14529 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CUX2O14529 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC26.07■■□□□ 1.76
CUX2O14529 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CUX2O14529 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
CUX2O14529 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CUX2O14529 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC26.07■■□□□ 1.76
CUX2O14529 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
CUX2O14529 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
CUX2O14529 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC26.06■■□□□ 1.76
CUX2O14529 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC26.06■■□□□ 1.76
CUX2O14529 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC26.06■■□□□ 1.76
CUX2O14529 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC26.06■■□□□ 1.76
CUX2O14529 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC26.06■■□□□ 1.76
CUX2O14529 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
CUX2O14529 Z69890.1-201ENST00000382990 339 ntBASIC26.06■■□□□ 1.76
CUX2O14529 MIR557-201ENST00000385239 98 ntBASIC26.06■■□□□ 1.76
CUX2O14529 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC26.06■■□□□ 1.76
CUX2O14529 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CUX2O14529 AC008723.1-201ENST00000506922 207 ntBASIC26.06■■□□□ 1.76
CUX2O14529 MIR5001-201ENST00000580185 100 ntBASIC26.06■■□□□ 1.76
CUX2O14529 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC26.06■■□□□ 1.76
CUX2O14529 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
CUX2O14529 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC26.06■■□□□ 1.76
CUX2O14529 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC26.06■■□□□ 1.76
CUX2O14529 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC26.06■■□□□ 1.76
CUX2O14529 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC26.06■■□□□ 1.76
CUX2O14529 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC26.06■■□□□ 1.76
CUX2O14529 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
CUX2O14529 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CUX2O14529 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CUX2O14529 AP000358.1-201ENST00000456260 156 ntBASIC26.05■■□□□ 1.76
CUX2O14529 AC093909.3-201ENST00000504783 336 ntBASIC26.05■■□□□ 1.76
CUX2O14529 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CUX2O14529 AC100827.2-201ENST00000563214 1194 ntBASIC26.05■■□□□ 1.76
CUX2O14529 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CUX2O14529 NAMA-206ENST00000605377 509 ntTSL 5 BASIC26.05■■□□□ 1.76
CUX2O14529 GPR39-203ENST00000622084 900 ntTSL 5 BASIC26.05■■□□□ 1.76
CUX2O14529 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
CUX2O14529 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
CUX2O14529 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CUX2O14529 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
CUX2O14529 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CUX2O14529 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC26.05■■□□□ 1.76
CUX2O14529 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
CUX2O14529 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
CUX2O14529 KRT8P21-201ENST00000430398 1491 ntBASIC26.05■■□□□ 1.76
CUX2O14529 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC26.05■■□□□ 1.76
CUX2O14529 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC26.05■■□□□ 1.76
CUX2O14529 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
CUX2O14529 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC26.05■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms