Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.87□□□□□ -0.03
UPK1AO00322 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.87□□□□□ -0.03
UPK1AO00322 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1AO00322 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1AO00322 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.86□□□□□ -0.03
UPK1AO00322 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1AO00322 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.86□□□□□ -0.03
UPK1AO00322 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
UPK1AO00322 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC14.86□□□□□ -0.03
UPK1AO00322 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1AO00322 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1AO00322 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1AO00322 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.86□□□□□ -0.03
UPK1AO00322 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1AO00322 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
UPK1AO00322 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1AO00322 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
UPK1AO00322 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1AO00322 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.86□□□□□ -0.03
UPK1AO00322 AZGP1P1-201ENST00000411909 902 ntBASIC14.86□□□□□ -0.03
UPK1AO00322 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.86□□□□□ -0.03
UPK1AO00322 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.86□□□□□ -0.03
UPK1AO00322 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.86□□□□□ -0.03
UPK1AO00322 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.86□□□□□ -0.03
UPK1AO00322 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
UPK1AO00322 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.86□□□□□ -0.03
UPK1AO00322 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.86□□□□□ -0.03
UPK1AO00322 AP001160.2-201ENST00000596071 487 ntBASIC14.86□□□□□ -0.03
UPK1AO00322 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.86□□□□□ -0.03
UPK1AO00322 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1AO00322 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.86□□□□□ -0.03
UPK1AO00322 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1AO00322 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1AO00322 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1AO00322 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.86□□□□□ -0.03
UPK1AO00322 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.86□□□□□ -0.03
UPK1AO00322 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.86□□□□□ -0.03
UPK1AO00322 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1AO00322 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
UPK1AO00322 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1AO00322 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.86□□□□□ -0.03
UPK1AO00322 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1AO00322 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.86□□□□□ -0.03
UPK1AO00322 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1AO00322 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.86□□□□□ -0.03
UPK1AO00322 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1AO00322 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UPK1AO00322 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.86□□□□□ -0.03
UPK1AO00322 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
UPK1AO00322 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1AO00322 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
UPK1AO00322 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
UPK1AO00322 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1AO00322 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.85□□□□□ -0.03
UPK1AO00322 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.85□□□□□ -0.03
UPK1AO00322 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.85□□□□□ -0.03
UPK1AO00322 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.85□□□□□ -0.03
UPK1AO00322 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
UPK1AO00322 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
UPK1AO00322 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
UPK1AO00322 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1AO00322 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1AO00322 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1AO00322 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1AO00322 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1AO00322 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
UPK1AO00322 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1AO00322 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.85□□□□□ -0.03
UPK1AO00322 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1AO00322 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.85□□□□□ -0.03
UPK1AO00322 HIST3H2BA-201ENST00000436555 524 ntBASIC14.85□□□□□ -0.03
UPK1AO00322 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC14.85□□□□□ -0.03
UPK1AO00322 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1AO00322 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.85□□□□□ -0.03
UPK1AO00322 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
UPK1AO00322 HNRNPUP1-201ENST00000554987 333 ntBASIC14.85□□□□□ -0.03
UPK1AO00322 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC14.85□□□□□ -0.03
UPK1AO00322 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
UPK1AO00322 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1AO00322 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.85□□□□□ -0.03
UPK1AO00322 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.85□□□□□ -0.03
UPK1AO00322 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.85□□□□□ -0.03
UPK1AO00322 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1AO00322 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1AO00322 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC14.85□□□□□ -0.03
UPK1AO00322 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1AO00322 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.85□□□□□ -0.03
UPK1AO00322 MROH4P-201ENST00000431302 1578 ntBASIC14.85□□□□□ -0.03
UPK1AO00322 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1AO00322 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1AO00322 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
UPK1AO00322 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1AO00322 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
UPK1AO00322 KRT8P12-202ENST00000472924 1397 ntBASIC14.85□□□□□ -0.03
UPK1AO00322 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1AO00322 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.84□□□□□ -0.03
UPK1AO00322 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1AO00322 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.84□□□□□ -0.03
UPK1AO00322 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
UPK1AO00322 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms