Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 AP001889.1-201ENST00000525414 633 ntBASIC15.52■□□□□ 0.08
TLR4O00206 AC068587.3-201ENST00000526613 355 ntBASIC15.52■□□□□ 0.08
TLR4O00206 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.52■□□□□ 0.08
TLR4O00206 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.52■□□□□ 0.08
TLR4O00206 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.52■□□□□ 0.08
TLR4O00206 AC009486.1-201ENST00000569860 813 ntBASIC15.52■□□□□ 0.08
TLR4O00206 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.52■□□□□ 0.08
TLR4O00206 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.52■□□□□ 0.08
TLR4O00206 AC097359.3-201ENST00000603982 1210 ntBASIC15.52■□□□□ 0.08
TLR4O00206 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15.52■□□□□ 0.08
TLR4O00206 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TLR4O00206 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
TLR4O00206 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
TLR4O00206 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TLR4O00206 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TLR4O00206 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.52■□□□□ 0.07
TLR4O00206 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
TLR4O00206 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC15.52■□□□□ 0.07
TLR4O00206 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TLR4O00206 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TLR4O00206 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TLR4O00206 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TLR4O00206 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TLR4O00206 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.52■□□□□ 0.07
TLR4O00206 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.52■□□□□ 0.07
TLR4O00206 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC15.52■□□□□ 0.07
TLR4O00206 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TLR4O00206 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.51■□□□□ 0.07
TLR4O00206 PAUPAR-201ENST00000630360 2965 ntBASIC15.51■□□□□ 0.07
TLR4O00206 TSPY26P-202ENST00000565928 3884 ntBASIC15.51■□□□□ 0.07
TLR4O00206 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TLR4O00206 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TLR4O00206 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.51■□□□□ 0.07
TLR4O00206 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
TLR4O00206 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TLR4O00206 AC105917.1-201ENST00000506637 2539 ntBASIC15.51■□□□□ 0.07
TLR4O00206 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TLR4O00206 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
TLR4O00206 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
TLR4O00206 HYMAI-201ENST00000635591 3347 ntBASIC15.51■□□□□ 0.07
TLR4O00206 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TLR4O00206 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TLR4O00206 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.51■□□□□ 0.07
TLR4O00206 AL607033.1-201ENST00000623900 1599 ntBASIC15.51■□□□□ 0.07
TLR4O00206 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TLR4O00206 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
TLR4O00206 AL355864.2-201ENST00000447420 863 ntBASIC15.51■□□□□ 0.07
TLR4O00206 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TLR4O00206 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TLR4O00206 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC15.51■□□□□ 0.07
TLR4O00206 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TLR4O00206 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC15.51■□□□□ 0.07
TLR4O00206 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC15.51■□□□□ 0.07
TLR4O00206 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TLR4O00206 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TLR4O00206 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TLR4O00206 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC15.51■□□□□ 0.07
TLR4O00206 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.51■□□□□ 0.07
TLR4O00206 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TLR4O00206 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TLR4O00206 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC15.51■□□□□ 0.07
TLR4O00206 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.51■□□□□ 0.07
TLR4O00206 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TLR4O00206 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TLR4O00206 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
TLR4O00206 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TLR4O00206 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TLR4O00206 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC15.5■□□□□ 0.07
TLR4O00206 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC15.5■□□□□ 0.07
TLR4O00206 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.5■□□□□ 0.07
TLR4O00206 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.5■□□□□ 0.07
TLR4O00206 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TLR4O00206 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TLR4O00206 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.5■□□□□ 0.07
TLR4O00206 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TLR4O00206 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TLR4O00206 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TLR4O00206 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
TLR4O00206 AC006449.6-201ENST00000612330 2296 ntBASIC15.5■□□□□ 0.07
TLR4O00206 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
TLR4O00206 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC15.5■□□□□ 0.07
TLR4O00206 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TLR4O00206 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
TLR4O00206 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC15.5■□□□□ 0.07
TLR4O00206 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
TLR4O00206 FAM86MP-201ENST00000340703 885 ntBASIC15.5■□□□□ 0.07
TLR4O00206 BAATP1-201ENST00000412284 1225 ntBASIC15.5■□□□□ 0.07
TLR4O00206 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
TLR4O00206 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.5■□□□□ 0.07
TLR4O00206 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.5■□□□□ 0.07
TLR4O00206 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.5■□□□□ 0.07
TLR4O00206 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
TLR4O00206 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.5■□□□□ 0.07
TLR4O00206 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.5■□□□□ 0.07
TLR4O00206 AL583810.1-201ENST00000553344 1045 ntBASIC15.5■□□□□ 0.07
TLR4O00206 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.5■□□□□ 0.07
TLR4O00206 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.5■□□□□ 0.07
TLR4O00206 CLUHP6-201ENST00000580789 941 ntBASIC15.5■□□□□ 0.07
TLR4O00206 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
TLR4O00206 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms