Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SMKR1H3BMG3 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC11.52□□□□□ -0.57
SMKR1H3BMG3 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC11.52□□□□□ -0.57
SMKR1H3BMG3 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SMKR1H3BMG3 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SMKR1H3BMG3 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC11.52□□□□□ -0.57
SMKR1H3BMG3 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
SMKR1H3BMG3 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC11.52□□□□□ -0.57
SMKR1H3BMG3 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SMKR1H3BMG3 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
SMKR1H3BMG3 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SMKR1H3BMG3 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
SMKR1H3BMG3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
SMKR1H3BMG3 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC11.52□□□□□ -0.57
SMKR1H3BMG3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SMKR1H3BMG3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC11.52□□□□□ -0.57
SMKR1H3BMG3 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
SMKR1H3BMG3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC11.52□□□□□ -0.57
SMKR1H3BMG3 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SMKR1H3BMG3 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC11.52□□□□□ -0.57
SMKR1H3BMG3 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SMKR1H3BMG3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SMKR1H3BMG3 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC11.52□□□□□ -0.57
SMKR1H3BMG3 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC11.52□□□□□ -0.57
SMKR1H3BMG3 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
SMKR1H3BMG3 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC11.52□□□□□ -0.57
SMKR1H3BMG3 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
SMKR1H3BMG3 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
SMKR1H3BMG3 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 RCN1P1-201ENST00000400413 996 ntBASIC11.51□□□□□ -0.57
SMKR1H3BMG3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 AC091076.1-201ENST00000610741 619 ntBASIC11.51□□□□□ -0.57
SMKR1H3BMG3 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 AC027601.5-201ENST00000624065 2482 ntBASIC11.51□□□□□ -0.57
SMKR1H3BMG3 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC11.51□□□□□ -0.57
SMKR1H3BMG3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC11.5□□□□□ -0.57
SMKR1H3BMG3 OS9-207ENST00000439210 1946 ntTSL 2 BASIC11.5□□□□□ -0.57
SMKR1H3BMG3 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SMKR1H3BMG3 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC11.5□□□□□ -0.57
SMKR1H3BMG3 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
SMKR1H3BMG3 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
SMKR1H3BMG3 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
SMKR1H3BMG3 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SMKR1H3BMG3 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC11.5□□□□□ -0.57
SMKR1H3BMG3 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SMKR1H3BMG3 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SMKR1H3BMG3 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC11.5□□□□□ -0.57
SMKR1H3BMG3 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SMKR1H3BMG3 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SMKR1H3BMG3 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SMKR1H3BMG3 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SMKR1H3BMG3 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SMKR1H3BMG3 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SMKR1H3BMG3 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC11.5□□□□□ -0.57
SMKR1H3BMG3 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms