Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 AC104457.1-201ENST00000401024 814 ntBASIC11.03□□□□□ -0.64
LINC01546A6NGU7 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 AP000867.3-201ENST00000524675 377 ntBASIC11.03□□□□□ -0.64
LINC01546A6NGU7 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 CR383656.2-201ENST00000548656 2254 ntBASIC11.03□□□□□ -0.64
LINC01546A6NGU7 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
LINC01546A6NGU7 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
LINC01546A6NGU7 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC11.02□□□□□ -0.64
LINC01546A6NGU7 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC11.02□□□□□ -0.64
LINC01546A6NGU7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
LINC01546A6NGU7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LINC01546A6NGU7 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
LINC01546A6NGU7 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
LINC01546A6NGU7 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LINC01546A6NGU7 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
LINC01546A6NGU7 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
LINC01546A6NGU7 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC11.02□□□□□ -0.64
LINC01546A6NGU7 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
LINC01546A6NGU7 INE2-201ENST00000630399 1874 ntBASIC11.02□□□□□ -0.64
LINC01546A6NGU7 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LINC01546A6NGU7 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC11.02□□□□□ -0.64
LINC01546A6NGU7 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
LINC01546A6NGU7 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
LINC01546A6NGU7 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC11.02□□□□□ -0.64
LINC01546A6NGU7 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
LINC01546A6NGU7 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 FGFR3P6-201ENST00000457012 610 ntBASIC11.02□□□□□ -0.65
LINC01546A6NGU7 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 CXCL1P1-201ENST00000502804 216 ntBASIC11.02□□□□□ -0.65
LINC01546A6NGU7 AC098859.1-201ENST00000502915 1238 ntBASIC11.02□□□□□ -0.65
LINC01546A6NGU7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 AL645728.2-202ENST00000641679 227 ntBASIC11.02□□□□□ -0.65
LINC01546A6NGU7 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 MVK-214ENST00000629016 1591 ntTSL 5 BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC11.02□□□□□ -0.65
LINC01546A6NGU7 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 700.3 ms